Crop phenomics and high-throughput phenotyping: past decades, current challenges, and future perspectives

W Yang, H Feng, X Zhang, J Zhang, JH Doonan… - Molecular plant, 2020 - cell.com
Since whole-genome sequencing of many crops has been achieved, crop functional
genomics studies have stepped into the big-data and high-throughput era. However …

How does nitrogen shape plant architecture?

L Luo, Y Zhang, G Xu - Journal of experimental botany, 2020 - academic.oup.com
Plant nitrogen (N), acquired mainly in the form of nitrate and ammonium from soil, dominates
growth and development, and high-yield crop production relies heavily on N fertilization. The …

Targeting a gene regulatory element enhances rice grain yield by decoupling panicle number and size

X Song, X Meng, H Guo, Q Cheng, Y Jing… - Nature …, 2022 - nature.com
Crop genetic improvement requires balancing complex tradeoffs caused by gene pleiotropy
and linkage drags, as exemplified by IPA1 (Ideal Plant Architecture 1), a typical pleiotropic …

A quantitative genomics map of rice provides genetic insights and guides breeding

X Wei, J Qiu, K Yong, J Fan, Q Zhang, H Hua, J Liu… - Nature Genetics, 2021 - nature.com
Extensive allelic variation in agronomically important genes serves as the basis of rice
breeding. Here, we present a comprehensive map of rice quantitative trait nucleotides …

Regain flood adaptation in rice through a 14-3-3 protein OsGF14h

J Sun, G Zhang, Z Cui, X Kong, X Yu, R Gui… - Nature …, 2022 - nature.com
Contemporary climatic stress seriously affects rice production. Unfortunately, long-term
domestication and improvement modified the phytohormones network to achieve the …

Plant genome resequencing and population genomics: Current status and future prospects

B Song, W Ning, D Wei, M Jiang, K Zhu, X Wang… - Molecular Plant, 2023 - cell.com
Advances in DNA sequencing technology have sparked a genomics revolution, driving
breakthroughs in plant genetics and crop breeding. Recently, the focus has shifted from …

Omics for the improvement of abiotic, biotic, and agronomic traits in major cereal crops: Applications, challenges, and prospects

B Kaur, KS Sandhu, R Kamal, K Kaur, J Singh… - Plants, 2021 - mdpi.com
Omics technologies, namely genomics, transcriptomics, proteomics, metabolomics, and
phenomics, are becoming an integral part of virtually every commercial cereal crop breeding …

Rice exposure to silver nanoparticles in a life cycle study: effect of dose responses on grain metabolomic profile, yield, and soil bacteria

X Yan, Z Pan, S Chen, N Shi, T Bai, L Dong… - Environmental …, 2022 - pubs.rsc.org
Here, we conducted a life-cycle study with rice grown in soil amended with different
concentrations (0, 1 and 10 mg kg− 1) of silver nanoparticles (AgNPs) for 120 days. A lower …

Single trait versus principal component based association analysis for flowering related traits in pigeonpea

K Kumar, P Anjoy, S Sahu, K Durgesh, A Das… - Scientific Reports, 2022 - nature.com
Pigeonpea, a tropical photosensitive crop, harbors significant diversity for days to flowering,
but little is known about the genes that govern these differences. Our goal in the current …

Regulation of DELLA proteins by post-translational modifications

N Blanco-Touriñán, A Serrano-Mislata… - Plant and Cell …, 2020 - academic.oup.com
DELLA proteins are the negative regulators of the gibberellin (GA) signaling pathway. GAs
have a pervasive effect on plant physiology, influencing processes that span the entire life …