Checkpoint responses to DNA double-strand breaks

DP Waterman, JE Haber… - Annual review of …, 2020 - annualreviews.org
Cells confront DNA damage in every cell cycle. Among the most deleterious types of DNA
damage are DNA double-strand breaks (DSBs), which can cause cell lethality if unrepaired …

The Paf1 complex: a keystone of nuclear regulation operating at the interface of transcription and chromatin

AM Francette, SA Tripplehorn, KM Arndt - Journal of molecular biology, 2021 - Elsevier
The regulation of transcription by RNA polymerase II is closely intertwined with the
regulation of chromatin structure. A host of proteins required for the disassembly …

In‐depth and 3‐dimensional exploration of the budding yeast phosphoproteome

MC Lanz, K Yugandhar, S Gupta, EJ Sanford… - EMBO …, 2021 - embopress.org
Phosphorylation is one of the most dynamic and widespread post‐translational
modifications regulating virtually every aspect of eukaryotic cell biology. Here, we assemble …

The DNA damage checkpoint: A tale from budding yeast

P Pizzul, E Casari, M Gnugnoli, C Rinaldi… - Frontiers in …, 2022 - frontiersin.org
Studies performed in the yeasts Saccharomyces cerevisiae and Schizosaccharomyces
pombe have led the way in defining the DNA damage checkpoint and in identifying most of …

A consensus set of genetic vulnerabilities to ATR inhibition

N Hustedt, A Álvarez-Quilón, A McEwan… - Open …, 2019 - royalsocietypublishing.org
The response to DNA replication stress in eukaryotes is under the control of the ataxia–
telangiectasia and Rad3-related (ATR) kinase. ATR responds to single-stranded (ss) DNA to …

Cell cycle and DNA repair regulation in the damage response: protein phosphatases take over the reins

A Campos, A Clemente-Blanco - International journal of molecular …, 2020 - mdpi.com
Cells are constantly suffering genotoxic stresses that affect the integrity of our genetic
material. Genotoxic insults must be repaired to avoid the loss or inappropriate transmission …

Mec1, INO80, and the PAF1 complex cooperate to limit transcription replication conflicts through RNAPII removal during replication stress

J Poli, CB Gerhold, A Tosi, N Hustedt… - Genes & …, 2016 - genesdev.cshlp.org
Little is known about how cells ensure DNA replication in the face of RNA polymerase II
(RNAPII)-mediated transcription, especially under conditions of replicative stress. Here we …

The INO80 remodeller in transcription, replication and repair

J Poli, SM Gasser… - … Transactions of the …, 2017 - royalsocietypublishing.org
The accessibility of eukaryotic genomes to the action of enzymes involved in transcription,
replication and repair is maintained despite the organization of DNA into nucleosomes. This …

PolySUMOylation by Siz2 and Mms21 triggers relocation of DNA breaks to nuclear pores through the Slx5/Slx8 STUbL

C Horigome, DE Bustard, I Marcomini… - Genes & …, 2016 - genesdev.cshlp.org
High-resolution imaging shows that persistent DNA damage in budding yeast localizes in
distinct perinuclear foci for repair. The signals that trigger DNA double-strand break (DSB) …

Phosphoproteomics reveals distinct modes of Mec1/ATR signaling during DNA replication

FMB de Oliveira, D Kim, JR Cussiol, J Das, MC Jeong… - Molecular cell, 2015 - cell.com
Summary The Mec1/Tel1 kinases (human ATR/ATM) play numerous roles in the DNA
replication stress response. Despite the multi-functionality of these kinases, studies of their …