Modulating biomolecular condensates: a novel approach to drug discovery

DM Mitrea, M Mittasch, BF Gomes, IA Klein… - Nature Reviews Drug …, 2022 - nature.com
In the past decade, membraneless assemblies known as biomolecular condensates have
been reported to play key roles in many cellular functions by compartmentalizing specific …

Deciphering molecular interactions by proximity labeling

W Qin, KF Cho, PE Cavanagh, AY Ting - Nature methods, 2021 - nature.com
Many biological processes are executed and regulated through the molecular interactions of
proteins and nucleic acids. Proximity labeling (PL) is a technology for tagging the …

Microenvironment mapping via Dexter energy transfer on immune cells

JB Geri, JV Oakley, T Reyes-Robles, T Wang… - Science, 2020 - science.org
Many disease pathologies can be understood through the elucidation of localized
biomolecular networks, or microenvironments. To this end, enzymatic proximity labeling …

Proximity dependent biotinylation: key enzymes and adaptation to proteomics approaches

P Samavarchi-Tehrani, R Samson… - Molecular & Cellular …, 2020 - ASBMB
The study of protein subcellular distribution, their assembly into complexes and the set of
proteins with which they interact with is essential to our understanding of fundamental …

Filling the void: proximity-based labeling of proteins in living cells

DI Kim, KJ Roux - Trends in cell biology, 2016 - cell.com
There are inherent limitations with traditional methods to study protein behavior or to
determine the constituency of proteins in discrete subcellular compartments. In response to …

Proteomic mapping of mitochondria in living cells via spatially restricted enzymatic tagging

HW Rhee, P Zou, ND Udeshi, JD Martell, VK Mootha… - Science, 2013 - science.org
Microscopy and mass spectrometry (MS) are complementary techniques: The former
provides spatiotemporal information in living cells, but only for a handful of recombinant …

Targeted activation in localized protein environments via deep red photoredox catalysis

NES Tay, KA Ryu, JL Weber, AK Olow, DC Cabanero… - Nature …, 2023 - nature.com
State-of-the-art photoactivation strategies in chemical biology provide spatiotemporal control
and visualization of biological processes. However, using high-energy light (λ< 500 nm) for …

Proximity‐dependent labeling methods for proteomic profiling in living cells: An update

JA Bosch, CL Chen, N Perrimon - Wiley Interdisciplinary …, 2021 - Wiley Online Library
Characterizing the proteome composition of organelles and subcellular regions of living
cells can facilitate the understanding of cellular organization as well as protein interactome …

Proximity histidine labeling by umpolung strategy using singlet oxygen

K Nakane, S Sato, T Niwa, M Tsushima… - Journal of the …, 2021 - ACS Publications
While electrophilic reagents for histidine labeling have been developed, we report an
umpolung strategy for histidine functionalization. A nucleophilic small molecule, 1-methyl-4 …

Molecular spatiomics by proximity labeling

MG Kang, HW Rhee - Accounts of Chemical Research, 2022 - ACS Publications
Conspectus Proximity labeling can be defined as an enzymatic “in-cell” chemical reaction
that catalyzes the proximity-dependent modification of biomolecules in live cells. Since the …