Deep learning methods for biomedical named entity recognition: a survey and qualitative comparison

B Song, F Li, Y Liu, X Zeng - Briefings in Bioinformatics, 2021 - academic.oup.com
The biomedical literature is growing rapidly, and the extraction of meaningful information
from the large amount of literature is increasingly important. Biomedical named entity …

[HTML][HTML] Character level and word level embedding with bidirectional LSTM–Dynamic recurrent neural network for biomedical named entity recognition from literature

S Gajendran, D Manjula, V Sugumaran - Journal of Biomedical Informatics, 2020 - Elsevier
Abstract Named Entity Recognition is the process of identifying different entities in a given
context. Biomedical Named Entity Recognition (BNER) is the task of extracting chemical …

[PDF][PDF] Cardiac Arrhythmia Disease Classification Using LSTM Deep Learning Approach.

MA Khan, Y Kim - Computers, Materials & Continua, 2021 - cdn.techscience.cn
Many approaches have been tried for the classification of arrhythmia. Due to the dynamic
nature of electrocardiogram (ECG) signals, it is challenging to use traditional handcrafted …

Chinese named entity recognition for apple diseases and pests based on character augmentation

J Zhang, M Guo, Y Geng, M Li, Y Zhang… - … and Electronics in …, 2021 - Elsevier
Aiming at the problems of Chinese named entity recognition in the field of apple diseases
and pests, including various entities categories, entities with aliases or abbreviations, and …

BioByGANS: biomedical named entity recognition by fusing contextual and syntactic features through graph attention network in node classification framework

X Zheng, H Du, X Luo, F Tong, W Song, D Zhao - BMC bioinformatics, 2022 - Springer
Background Automatic and accurate recognition of various biomedical named entities from
literature is an important task of biomedical text mining, which is the foundation of extracting …

A study on standardization of security evaluation information for chemical processes based on deep learning

L Peng, D Gao, Y Bai - Processes, 2021 - mdpi.com
Hazard and operability analysis (HAZOP) is one of the most commonly used hazard analysis
methods in the petrochemical industry. The large amount of unstructured data in HAZOP …

Named entity recognition of diseases and pests with small samples based on space mapping

H Liang, Y Zhou, Y Wang, X Xu, Y Wei… - 2022 Euro-Asia …, 2022 - ieeexplore.ieee.org
In the field of agricultural pests and diseases, there is a lack of annotated data and standard
word formations, so standard Named entity recognition (NER) technology is not effective …

Using deep neural network to recognize mutation entities in biomedical literature

F Tong, Z Luo, D Zhao - 2018 IEEE International Conference on …, 2018 - ieeexplore.ieee.org
Automatic recognizing mutation mentions plays a fundamental and critical role in extracting
variant-disease relation from biomedical literature. In this paper, we proposed an advanced …

Social Network Science Approaches for Disease Named Entity Recognition and Extraction

S Joshi, S Kamath - 2024 International Conference on …, 2024 - ieeexplore.ieee.org
Conventional machine learning approaches adopted for large-scale social media analysis
have encountered significant limitations in capturing the underlying dynamics, evolution …

An Efficient and User-Friendly Software for PCR Primer Design for Detection of Highly Variable Bacteria

D Hu, W Qu, F Tong, X Zheng, J Li, D Zhao - International Symposium on …, 2022 - Springer
Objective: To design and implement a simple and highly integrated primer design software
for detection of highly variable bacteria. Methods: Firstly, gene named entity recognition …