Protein data bank: a comprehensive review of 3D structure holdings and worldwide utilization by researchers, educators, and students
The Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB),
funded by the United States National Science Foundation, National Institutes of Health, and …
funded by the United States National Science Foundation, National Institutes of Health, and …
RCSB Protein Data Bank: powerful new tools for exploring 3D structures of biological macromolecules for basic and applied research and education in fundamental …
Abstract The Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB
PDB), the US data center for the global PDB archive and a founding member of the …
PDB), the US data center for the global PDB archive and a founding member of the …
RCSB Protein Data Bank: biological macromolecular structures enabling research and education in fundamental biology, biomedicine, biotechnology and energy
Abstract The Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB
PDB, rcsb. org), the US data center for the global PDB archive, serves thousands of Data …
PDB, rcsb. org), the US data center for the global PDB archive, serves thousands of Data …
Uranium (VI) bio-coordination chemistry from biochemical, solution and protein structural data
JD Van Horn, H Huang - Coordination chemistry reviews, 2006 - Elsevier
The biocoordination chemistry of the uranyl cation (uranium (VI),[UO2] 2+) is assessed
utilizing data from the Protein Databank, solution thermodynamic data and biochemical …
utilizing data from the Protein Databank, solution thermodynamic data and biochemical …
RCSB Protein Data Bank: Celebrating 50 years of the PDB with new tools for understanding and visualizing biological macromolecules in 3D
Abstract The Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB
PDB), funded by the US National Science Foundation, National Institutes of Health, and …
PDB), funded by the US National Science Foundation, National Institutes of Health, and …
The Carbohydrate-Active EnZymes database (CAZy): an expert resource for glycogenomics
Abstract The Carbohydrate-Active Enzyme (CAZy) database is a knowledge-based resource
specialized in the enzymes that build and breakdown complex carbohydrates and …
specialized in the enzymes that build and breakdown complex carbohydrates and …
Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences
Abstract Motivation: In 2001 and 2002, we published two papers (Bioinformatics, 17, 282–
283, Bioinformatics, 18, 77–82) describing an ultrafast protein sequence clustering program …
283, Bioinformatics, 18, 77–82) describing an ultrafast protein sequence clustering program …
PDB2PQR: an automated pipeline for the setup of Poisson–Boltzmann electrostatics calculations
TJ Dolinsky, JE Nielsen, JA McCammon… - Nucleic acids …, 2004 - academic.oup.com
Continuum solvation models, such as Poisson–Boltzmann and Generalized Born methods,
have become increasingly popular tools for investigating the influence of electrostatics on …
have become increasingly popular tools for investigating the influence of electrostatics on …
The HHpred interactive server for protein homology detection and structure prediction
HHpred is a fast server for remote protein homology detection and structure prediction and is
the first to implement pairwise comparison of profile hidden Markov models (HMMs). It …
the first to implement pairwise comparison of profile hidden Markov models (HMMs). It …
STRIDE: a web server for secondary structure assignment from known atomic coordinates of proteins
M Heinig, D Frishman - Nucleic acids research, 2004 - academic.oup.com
STRIDE is a software tool for secondary structure assignment from atomic resolution protein
structures. It implements a knowledge-based algorithm that makes combined use of …
structures. It implements a knowledge-based algorithm that makes combined use of …