Simpler models in environmental studies and predictions

EM Hong, YA Pachepsky, G Whelan… - Critical Reviews in …, 2017 - Taylor & Francis
This review outlines major directions of simpler model development in environmental
modeling, metamodeling, statistical-regression-and machine-learning-based empirical …

A novel object-oriented directed path screening method for reduction of detailed chemical kinetic mechanism

W Li, T Xuan, Q Wang, L Dai - Combustion and Flame, 2023 - Elsevier
Numerical simulation is widely recognized as an efficient means of developing high-
performance combustors. However, its efficiency is limited by the growing size of chemical …

Mathematical modelling for complex biochemical networks and identification of fast and slow reactions

SHA Khoshnaw, HM Rasool - The international conference on …, 2019 - Springer
This paper reviews some mathematical models of biochemical reaction networks. The
models contain a large number species and reactions. This is a difficult task and it requires …

Learning reduced kinetic Monte Carlo models of complex chemistry from molecular dynamics

Q Yang, CA Sing-Long, EJ Reed - Chemical science, 2017 - pubs.rsc.org
We propose a novel statistical learning framework for automatically and efficiently building
reduced kinetic Monte Carlo (KMC) models of large-scale elementary reaction networks …

Reduction of reaction mechanisms

T Turányi, AS Tomlin, T Turányi, AS Tomlin - Analysis of Kinetic Reaction …, 2014 - Springer
Increases in both chemical kinetics knowledge and the capacity of computers have led to the
availability of very large detailed kinetic mechanisms for many problems. These …

Model reductions in biochemical reaction networks

SHA Khoshnaw - 2015 - figshare.le.ac.uk
Many complex kinetic models in the field of biochemical reactions contain a large number of
species and reactions. These models often require a huge array of computational tools to …

Grasping complexity

AN Gorban, GS Yablonsky - arXiv preprint arXiv:1303.3855, 2013 - arxiv.org
The century of complexity has come. The face of science has changed. Surprisingly, when
we start asking about the essence of these changes and then critically analyse the answers …

[HTML][HTML] Rapid data-driven model reduction of nonlinear dynamical systems including chemical reaction networks using ℓ1-regularization

Q Yang, CA Sing-Long, EJ Reed - Chaos: An Interdisciplinary Journal …, 2020 - pubs.aip.org
Large-scale nonlinear dynamical systems, such as models of atmospheric hydrodynamics,
chemical reaction networks, and electronic circuits, often involve thousands or more …

Entropy production and lumping of species can effectively reduce complex cell signaling pathways

SHA Khoshnaw, HM Rasool - Physica Scripta, 2022 - iopscience.iop.org
A complicated issue in many cell signaling pathways is mainly related to the number of state
variables and parameters. This is computationally very expensive, it may sometimes difficult …

Reduction of a kinetic model of active export of importins

SHA Khoshnaw - Conference Publications, 2015 - aimsciences.org
We study a kinetic model of active export of importins. The kinetic model is written as a
system of ordinary differential equations. We developed some model reduction techniques …