[HTML][HTML] Drug discovery with explainable artificial intelligence

J Jiménez-Luna, F Grisoni, G Schneider - Nature Machine Intelligence, 2020 - nature.com
Deep learning bears promise for drug discovery, including advanced image analysis,
prediction of molecular structure and function, and automated generation of innovative …

Explainable Artificial Intelligence (XAI): Concepts, taxonomies, opportunities and challenges toward responsible AI

AB Arrieta, N Díaz-Rodríguez, J Del Ser, A Bennetot… - Information fusion, 2020 - Elsevier
In the last few years, Artificial Intelligence (AI) has achieved a notable momentum that, if
harnessed appropriately, may deliver the best of expectations over many application sectors …

[HTML][HTML] DeepTox: toxicity prediction using deep learning

A Mayr, G Klambauer, T Unterthiner… - Frontiers in …, 2016 - frontiersin.org
The Tox21 Data Challenge has been the largest effort of the scientific community to compare
computational methods for toxicity prediction. This challenge comprised 12,000 …

QSAR modeling: where have you been? Where are you going to?

A Cherkasov, EN Muratov, D Fourches… - Journal of medicinal …, 2014 - ACS Publications
Quantitative structure–activity relationship modeling is one of the major computational tools
employed in medicinal chemistry. However, throughout its entire history it has drawn both …

[HTML][HTML] Deep-learning: investigating deep neural networks hyper-parameters and comparison of performance to shallow methods for modeling bioactivity data

A Koutsoukas, KJ Monaghan, X Li, J Huan - Journal of cheminformatics, 2017 - Springer
Background In recent years, research in artificial neural networks has resurged, now under
the deep-learning umbrella, and grown extremely popular. Recently reported success of DL …

Predicting academic performance by considering student heterogeneity

S Helal, J Li, L Liu, E Ebrahimie, S Dawson… - Knowledge-Based …, 2018 - Elsevier
The capacity to predict student academic outcomes is of value for any educational institution
aiming to improve student performance and persistence. Based on the generated …

Explainable machine learning for property predictions in compound optimization: miniperspective

R Rodríguez-Pérez, J Bajorath - Journal of medicinal chemistry, 2021 - ACS Publications
The prediction of compound properties from chemical structure is a main task for machine
learning (ML) in medicinal chemistry. ML is often applied to large data sets in applications …

[HTML][HTML] Large-scale comparison of machine learning methods for drug target prediction on ChEMBL

A Mayr, G Klambauer, T Unterthiner, M Steijaert… - Chemical …, 2018 - pubs.rsc.org
Deep learning is currently the most successful machine learning technique in a wide range
of application areas and has recently been applied successfully in drug discovery research …

Advancing computational toxicology by interpretable machine learning

X Jia, T Wang, H Zhu - Environmental Science & Technology, 2023 - ACS Publications
Chemical toxicity evaluations for drugs, consumer products, and environmental chemicals
have a critical impact on human health. Traditional animal models to evaluate chemical …

[HTML][HTML] eToxPred: a machine learning-based approach to estimate the toxicity of drug candidates

L Pu, M Naderi, T Liu, HC Wu, S Mukhopadhyay… - BMC Pharmacology and …, 2019 - Springer
Background The efficiency of drug development defined as a number of successfully
launched new pharmaceuticals normalized by financial investments has significantly …