A survey on tree edit distance and related problems

P Bille - Theoretical computer science, 2005 - Elsevier
We survey the problem of comparing labeled trees based on simple local operations of
deleting, inserting, and relabeling nodes. These operations lead to the tree edit distance …

Alignment of trees—an alternative to tree edit

T Jiang, L Wang, K Zhang - Theoretical computer science, 1995 - Elsevier
In this paper, we propose the alignment of trees as a measure of the similarity between two
labeled trees. Both ordered and unordered trees are considered. An algorithm is designed …

[PDF][PDF] A compendium of NP optimization problems

P Crescenzi, V Kann, M Halldórsson - 1995 - Citeseer
Due to the fact that no NP-complete problem can be solved in polynomial time (unless P=
NP), many approximability results (both positive and negative) of NP-hard optimization …

[图书][B] Pattern matching algorithms

A Apostolico, Z Galil - 1997 - books.google.com
Issues of matching and searching on elementary discrete structures arise pervasively in
computer science and many of its applications, and their relevance is expected to grow as …

A constrained edit distance between unordered labeled trees

K Zhang - Algorithmica, 1996 - Springer
This paper considers the problem of computing a constrained edit distance between
unordered labeled trees. The problem of approximate unordered tree matching is also …

Structured merge with auto-tuning: balancing precision and performance

S Apel, O Leßenich, C Lengauer - Proceedings of the 27th IEEE/ACM …, 2012 - dl.acm.org
Software-merging techniques face the challenge of finding a balance between precision and
performance. In practice, developers use unstructured-merge (ie, line-based) tools, which …

Metrics for comparing neuronal tree shapes based on persistent homology

Y Li, D Wang, GA Ascoli, P Mitra, Y Wang - PloS one, 2017 - journals.plos.org
As more and more neuroanatomical data are made available through efforts such as
NeuroMorpho. Org and FlyCircuit. org, the need to develop computational tools to facilitate …

Algorithms for the constrained editing distance between ordered labeled trees and related problems

K Zhang - Pattern recognition, 1995 - Elsevier
This paper considers the problem of computing a constrained editing distance between
ordered labeled trees. This distance metric can be applied to pattern recognition, syntactic …

Branch Decomposition‐Independent Edit Distances for Merge Trees

F Wetzels, H Leitte, C Garth - Computer Graphics Forum, 2022 - Wiley Online Library
Edit distances between merge trees of scalar fields have many applications in scientific
visualization, such as ensemble analysis, feature tracking or symmetry detection. In this …

Subtree isomorphism revisited

A Abboud, A Backurs, TD Hansen… - ACM Transactions on …, 2018 - dl.acm.org
The Subtree Isomorphism problem asks whether a given tree is contained in another given
tree. The problem is of fundamental importance and has been studied since the 1960s. For …