The role of single-cell genomics in human genetics

VKA Sreenivasan, S Balachandran… - Journal of medical …, 2022 - jmg.bmj.com
Single-cell sequencing is a powerful approach that can detect genetic alterations and their
phenotypic consequences in the context of human development, with cellular resolution …

Relating pathogenic loss-of-function mutations in humans to their evolutionary fitness costs

I Agarwal, ZL Fuller, SR Myers, M Przeworski - Elife, 2023 - elifesciences.org
Causal loss-of-function (LOF) variants for Mendelian and severe complex diseases are
enriched in'mutation intolerant'genes. We show how such observations can be interpreted in …

Multi-omic profiling of the developing human cerebral cortex at the single-cell level

K Zhu, J Bendl, S Rahman, JM Vicari, C Coleman… - Science …, 2023 - science.org
The cellular complexity of the human brain is established via dynamic changes in gene
expression throughout development that is mediated, in part, by the spatiotemporal activity …

Population sequencing data reveal a compendium of mutational processes in the human germ line

VB Seplyarskiy, RA Soldatov, E Koch, RJ McGinty… - Science, 2021 - science.org
Biological mechanisms underlying human germline mutations remain largely unknown. We
statistically decompose variation in the rate and spectra of mutations along the genome …

Identification of aberrant innate and adaptive immunity based on changes in global gene expression in the blood of adults with autism spectrum disorder

F Horiuchi, Y Yoshino, H Kumon, R Hosokawa… - Journal of …, 2021 - Springer
Background Autism spectrum disorder (ASD) is characterized as a neurodevelopmental
disorder, and one of the main hypotheses regarding its cause is genetic factors. A previous …

De novo mutations identified by whole-genome sequencing implicate chromatin modifications in obsessive-compulsive disorder

GN Lin, W Song, W Wang, P Wang, H Yu, W Cai… - Science …, 2022 - science.org
Obsessive-compulsive disorder (OCD) is a chronic anxiety disorder with a substantial
genetic basis and a broadly undiscovered etiology. Recent studies of de novo mutation …

[HTML][HTML] A massively parallel screen of 5′ UTR mutations identifies variants impacting translation and protein production in neurodevelopmental disorder genes

SP Plassmeyer, CP Florian, MJ Kasper, R Chase… - medRxiv, 2023 - ncbi.nlm.nih.gov
De novo mutations cause a variety of neurodevelopmental disorders including autism.
Recent whole genome sequencing from individuals with autism has shown that many de …

[HTML][HTML] Proteome-Wide Assessment of Clustering of Missense Variants in Neurodevelopmental Disorders Versus Cancer

JK Ng, Y Chen, TM Akinwe, HB Heins, E Mehinovic… - medRxiv, 2024 - ncbi.nlm.nih.gov
Missense de novo variants (DNVs) and missense somatic variants contribute to
neurodevelopmental disorders (NDDs) and cancer, respectively. Proteins with statistical …

Characterizing the clinical and sociodemographic profiles of hospitalized adolescents with autism spectrum disorder

M Avrahami, DH Ben-Dor, R Ratzon… - … Prisms: Global Mental …, 2024 - cambridge.org
The prevalence of autism spectrum disorder (ASD) is increasing worldwide. Youngsters with
ASD demonstrate higher rates of intellectual disabilities (IDs), comorbid psychopathology …

Prioritizing de novo autism risk variants with calibrated gene-and variant-scoring models

Y Jiang, J Urresti, KA Pagel, AB Pramod… - Human genetics, 2022 - Springer
Whole-exome and whole-genome sequencing studies in autism spectrum disorder (ASD)
have identified hundreds of thousands of exonic variants. Only a handful of them, primarily …