Turning liabilities into opportunities: Off-target based drug repurposing in cancer

V Palve, Y Liao, LLR Rix, U Rix - Seminars in cancer biology, 2021 - Elsevier
Targeted drugs and precision medicine have transformed the landscape of cancer therapy
and significantly improved patient outcomes in many cases. However, as therapies are …

Chemotherapy-induced COX-2 upregulation by cancer cells defines their inflammatory properties and limits the efficacy of chemoimmunotherapy combinations

CR Bell, VS Pelly, A Moeini, SC Chiang… - Nature …, 2022 - nature.com
Cytotoxic therapies, besides directly inducing cancer cell death, can stimulate immune-
dependent tumor growth control or paradoxically accelerate tumor progression. The …

Connecting omics signatures and revealing biological mechanisms with iLINCS

M Pilarczyk, M Fazel-Najafabadi, M Kouril… - Nature …, 2022 - nature.com
There are only a few platforms that integrate multiple omics data types, bioinformatics tools,
and interfaces for integrative analyses and visualization that do not require programming …

mTOR/EGFR/iNOS/MAP2K1/FGFR/TGFB1 are druggable candidates for N-(2, 4-difluorophenyl)-2′, 4′-difluoro-4-hydroxybiphenyl-3-carboxamide (NSC765598) …

B Lawal, CY Lee, N Mokgautsi, MR Sumitra… - Frontiers in …, 2021 - frontiersin.org
Background The application of computational and multi-omics approaches has aided our
understanding of carcinogenesis and the development of therapeutic strategies …

Chromatin remodeling and immediate early gene activation by SLFN11 in response to replication stress

J Murai, H Zhang, L Pongor, SW Tang, U Jo, F Moribe… - Cell reports, 2020 - cell.com
Summary Schlafen 11 (SLFN11) was recently discovered as a cellular restriction factor
against replication stress. Here, we show that SLFN11 increases chromatin accessibility …

[HTML][HTML] Q-omics: smart software for assisting oncology and cancer research

J Lee, Y Kim, S Jin, H Yoo, S Jeong, E Jeong, S Yoon - Molecules and cells, 2021 - Elsevier
The rapid increase in collateral omics and phenotypic data has enabled data-driven studies
for the fast discovery of cancer targets and biomarkers. Thus, it is necessary to develop …

Quantitative proteome landscape of the NCI-60 cancer cell lines

T Guo, A Luna, VN Rajapakse, CC Koh, Z Wu, W Liu… - Iscience, 2019 - cell.com
Here we describe a proteomic data resource for the NCI-60 cell lines generated by pressure
cycling technology and SWATH mass spectrometry. We developed the DIA-expert software …

Mitochondrial RNA methyltransferase TRMT61B is a new, potential biomarker and therapeutic target for highly aneuploid cancers

A Martín, C Epifano, B Vilaplana-Marti… - Cell Death & …, 2023 - nature.com
Despite being frequently observed in cancer cells, chromosomal instability (CIN) and its
immediate consequence, aneuploidy, trigger adverse effects on cellular homeostasis that …

Sorafenib inhibits ribonucleotide reductase regulatory subunit M2 (RRM2) in hepatocellular carcinoma cells

PM Yang, LS Lin, TP Liu - Biomolecules, 2020 - mdpi.com
The main curative treatments for hepatocellular carcinoma (HCC) are surgical resection and
liver transplantation, which only benefits 15% to 25% of patients. In addition, HCC is highly …

Molecular basis of GDF15 induction and suppression by drugs in cardiomyocytes and cancer cells toward precision medicine

LM Winter, D Reinhardt, A Schatter, V Tissen… - Scientific Reports, 2023 - nature.com
GDF15 has recently emerged as a key driver of the development of various disease
conditions including cancer cachexia. Not only the tumor itself but also adverse effects of …