Omics approaches in Allium research: Progress and way ahead

K Khandagale, R Krishna, P Roylawar, AB Ade… - PeerJ, 2020 - peerj.com
Background The genus Allium (Family: Amaryllidaceae) is an economically important group
of crops cultivated worldwide for their use as a vegetable and spices. Alliums are also well …

A comprehensive and conceptual overview of omics-based approaches for enhancing the resilience of vegetable crops against abiotic stresses

V Mangal, MK Lal, RK Tiwari, MA Altaf, S Sood… - Planta, 2023 - Springer
Main conclusion Abiotic stresses adversely affect the productivity and production of
vegetable crops. The increasing number of crop genomes that have been sequenced or re …

Comparative transcriptome analyses in contrasting onion (Allium cepa L.) genotypes for drought stress

P Ghodke, K Khandagale, A Thangasamy, A Kulkarni… - PLoS …, 2020 - journals.plos.org
Onion (Allium cepa L.) is an important vegetable crop widely grown for diverse culinary and
nutraceutical properties. Being a shallow-rooted plant, it is prone to drought. In the present …

[HTML][HTML] Integrated transcriptomic and metabolomics analysis reveals abscisic acid signal transduction and sugar metabolism pathways as defense responses to cold …

H Xu, J Li, L Wang, X Li, Y Liu, X Wang, T Gao… - … and Experimental Botany, 2023 - Elsevier
Argyranthemum frutescens is an important ornamental plant, whose distribution and
application is limited owing to its susceptibility to low temperatures. The molecular …

Transcriptome analysis of chrysanthemum (Dendranthema grandiflorum) in response to low temperature stress

K Wang, Z Bai, Q Liang, Q Liu, L Zhang, Y Pan, G Liu… - Bmc Genomics, 2018 - Springer
Background Chrysanthemum is one kind of ornamental plant well-known and widely used in
the world. However, its quality and production were severely affected by low temperature …

Transcriptomic analysis reveals a role of phenylpropanoid pathway in the enhancement of chilling tolerance by pre-storage cold acclimation in cucumber fruit

B Wang, C Wu, G Wang, J He, S Zhu - Scientia Horticulturae, 2021 - Elsevier
Cucumber fruits are susceptible to chilling injury, which can cause severe quality losses. In
this study, pre-storage cold acclimation (PsCA, 10° C for 72 h) significantly induced chilling …

Transcriptome analysis of Sesuvium portulacastrum L. uncovers key genes and pathways involved in root formation in response to low-temperature stress

J Yang, S Lin, Y Shen, J Ye, X Jiang, S Li… - Plant Molecular Biology, 2024 - Springer
Sesuvium portulacastrum L., a perennial facultative halophyte, is extensively distributed
across tropical and subtropical coastal regions. Its limited cold tolerance significantly …

Comprehensive transcriptome analysis reveals common and specific genes and pathways involved in cold acclimation and cold stress in tea plant leaves

X Hao, B Wang, L Wang, J Zeng, Y Yang, X Wang - Scientia Horticulturae, 2018 - Elsevier
Freezing temperatures during the winter and unusual temperature fluctuations during the
winter and early spring are the most harmful ambient factors threatening tea plant winter …

DREB1 and DREB2 Genes in Garlic (Allium sativum L.): Genome-Wide Identification, Characterization, and Stress Response

MA Filyushin, OK Anisimova, AV Shchennikova… - Plants, 2023 - mdpi.com
Dehydration-responsive element-binding (DREB) transcription factors (TFs) of the A1 and
A2 subfamilies involved in plant stress responses have not yet been reported in Allium …

SNP discovery of Korean short day onion inbred lines using double digest restriction site-associated DNA sequencing

JH Lee, S Natarajan, MK Biswas, K Shirasawa… - PloS one, 2018 - journals.plos.org
Onion (Allium cepa L.) is an economically important vegetable crop around the world.
Genetic and genomic research into various onion accessions will provide insights into the …