Lake sedimentary DNA research on past terrestrial and aquatic biodiversity: Overview and recommendations

E Capo, C Giguet-Covex, A Rouillard, K Nota… - Quaternary, 2021 - mdpi.com
The use of lake sedimentary DNA to track the long-term changes in both terrestrial and
aquatic biota is a rapidly advancing field in paleoecological research. Although largely …

Natural vs anthropogenic streams in Europe: History, ecology and implications for restoration, river-rewilding and riverine ecosystem services

AG Brown, L Lespez, DA Sear, JJ Macaire… - Earth-Science …, 2018 - Elsevier
Abstract In Europe and North America the prevailing model of “natural” lowland streams is
incised-meandering channels with silt-clay floodplains, and this is the typical template for …

[HTML][HTML] Origin, dynamics, and implications of extracellular DNA pools in marine sediments

A Torti, MA Lever, BB Jørgensen - Marine genomics, 2015 - Elsevier
In marine sediments, DNA occurs both inside and outside living organisms. DNA not
enclosed in living cells may account for the largest fraction of total DNA, and include …

Ancient plant DNA in lake sediments

L Parducci, KD Bennett, GF Ficetola, IG Alsos… - New …, 2017 - Wiley Online Library
Contents Summary 924 I. Introduction 925 II. Environmental and temporal limits for survival
of aDNA 925 III. Lake sediments 927 IV. Perspective for plant aDNA research 929 V …

Plant DNA metabarcoding of lake sediments: How does it represent the contemporary vegetation

IG Alsos, Y Lammers, NG Yoccoz, T Jørgensen… - PloS one, 2018 - journals.plos.org
Metabarcoding of lake sediments have been shown to reveal current and past biodiversity,
but little is known about the degree to which taxa growing in the vegetation are represented …

High resolution ancient sedimentary DNA shows that alpine plant diversity is associated with human land use and climate change

S Garcés-Pastor, E Coissac, S Lavergne… - Nature …, 2022 - nature.com
Abstract The European Alps are highly rich in species, but their future may be threatened by
ongoing changes in human land use and climate. Here, we reconstructed vegetation …

Microbial survival strategies in ancient permafrost: insights from metagenomics

R Mackelprang, A Burkert, M Haw… - The ISME …, 2017 - academic.oup.com
In permafrost (perennially frozen ground) microbes survive oligotrophic conditions, sub-zero
temperatures, low water availability and high salinity over millennia. Viable life exists in …

Environmental DNA of aquatic macrophytes: The potential for reconstructing past and present vegetation and environments

A Revéret, DP Rijal, PD Heintzman… - Freshwater …, 2023 - Wiley Online Library
Environmental DNA is increasingly being used to reconstruct past and present biodiversity
including from freshwater ecosystems. Macrophytes are especially good environmental …

Sedimentary ancient DNA from Lake Skartjørna, Svalbard: Assessing the resilience of arctic flora to Holocene climate change

IG Alsos, P Sjögren, ME Edwards, JY Landvik… - The …, 2016 - journals.sagepub.com
Reconstructing past vegetation and species diversity from arctic lake sediments can be
challenging because of low pollen and plant macrofossil concentrations. Information may be …

[HTML][HTML] A 24,000-year ancient DNA and pollen record from the Polar Urals reveals temporal dynamics of arctic and boreal plant communities

CL Clarke, IG Alsos, ME Edwards, A Paus… - Quaternary Science …, 2020 - Elsevier
Abstract A 24,000-year record of plant community dynamics, based on pollen and ancient
DNA from the sediments (sedaDNA) of Lake Bolshoye Shchuchye in the Polar Ural …