Microbial interactions shape cheese flavour formation

C Melkonian, F Zorrilla, I Kjærbølling, S Blasche… - Nature …, 2023 - nature.com
Cheese fermentation and flavour formation are the result of complex biochemical reactions
driven by the activity of multiple microorganisms. Here, we studied the roles of microbial …

Molecular methodologies for improved polymicrobial sepsis diagnosis

M Doualeh, M Payne, E Litton, E Raby… - International Journal of …, 2022 - mdpi.com
Polymicrobial sepsis is associated with worse patient outcomes than monomicrobial sepsis.
Routinely used culture-dependent microbiological diagnostic techniques have low …

Interactions between culturable bacteria are predicted by individual species' growth

E Nestor, G Toledano, J Friedman - Msystems, 2023 - Am Soc Microbiol
Predicting interspecies interactions is a key challenge in microbial ecology given that
interactions shape the composition and functioning of microbial communities. However …

Metatranscriptomics-based metabolic modeling of patient-specific urinary microbiome during infection

J Josephs-Spaulding, HC Rettig, J Zimmermann… - bioRxiv, 2024 - biorxiv.org
Urinary tract infections (UTIs) are a major health concern which incurs significant
socioeconomic costs in addition to substantial antibiotic prescriptions, thereby accelerating …

Inter-species metabolic interactions in cheese flavour formation

C Melkonian, F Zorrilla, I Kjærbølling, S Blasche… - 2023 - researchsquare.com
Cheese fermentation and flavour formation are governed by complex biochemical reactions
driven by polymicrobial activity. While the compositional dynamics of cheese microbiomes is …

Microbial interactions affect the tempo and mode of antibiotic resistance evolution

LE Zandbergen, J van den Heuvel, AD Farr, BJ Zwaan… - bioRxiv, 2024 - biorxiv.org
The global rise of antibiotic resistance impedes the treatment of bacterial infections. To limit
the emergence and evolution of antibiotic resistance it is important to understand how …

Special Issue “Omics Research of Pathogenic Microorganisms”

P Baarlen - Genes, 2023 - mdpi.com
Infectious diseases of plants, animals and humans pose a serious threat to global health
and seriously impact ecosystem stability and agriculture, including food security. In recent …

Combining omics data and genome-scale models to understand metabolic adaptations in lactic acid bacteria to changing environments

SB Loghmani - 2022 - archiv.ub.uni-heidelberg.de
Lactic acid bacteria are a group of bacteria that share the characteristic of lactate
fermentation, and are in particular focus of microbiological research not only because of …