The current research status and prospects of AI in chemical science

M Yuan, Q Guo, Y Wang - Progress in Natural Science: Materials …, 2024 - Elsevier
This paper primarily examines the utilization and obstacles of AI in the domain of chemistry.
Machine learning facilitates the advancement of chemical research at every level through …

Discovering drug–target interaction knowledge from biomedical literature

Y Hou, Y Xia, L Wu, S Xie, Y Fan, J Zhu, T Qin… - …, 2022 - academic.oup.com
Motivation The interaction between drugs and targets (DTI) in human body plays a crucial
role in biomedical science and applications. As millions of papers come out every year in the …

Prompt Tuning in Biomedical Relation Extraction

J He, F Li, J Li, X Hu, Y Nian, Y Xiang, J Wang… - Journal of Healthcare …, 2024 - Springer
Biomedical relation extraction (RE) is critical in constructing high-quality knowledge graphs
and databases as well as supporting many downstream text mining applications. This paper …

Extracting chemical-protein interactions via calibrated deep neural network and self-training

D Choi, H Lee - arXiv preprint arXiv:2011.02207, 2020 - arxiv.org
The extraction of interactions between chemicals and proteins from several biomedical
articles is important in many fields of biomedical research such as drug development and …

[PDF][PDF] BioCreative VII-Track 1: a BERT-based system for relation extraction in biomedical text

D Mahendran, S Ranjan, J Tang, M Nguyen… - BioCreative VII …, 2021 - par.nsf.gov
This paper describes our team's participation in Track 1 of the BioCreative VII challenge to
automatically detect relations between chemical compounds/drugs and genes/proteins …

Automated recognition of functional compound-protein relationships in literature

K Döring, A Qaseem, M Becer, J Li, P Mishra, M Gao… - Plos one, 2020 - journals.plos.org
Motivation Much effort has been invested in the identification of protein-protein interactions
using text mining and machine learning methods. The extraction of functional relationships …

Drug protein interaction extraction using scibert based deep learning model

N GabAllah, A Rafea - The International Conference on Innovations in …, 2022 - Springer
Abstract Information extraction from textual data is becoming more crucial with the increase
of available data on the internet. Automatic extraction of information from biomedical data is …

eMIND: Enabling automatic collection of protein variation impacts in Alzheimer's disease from the literature

S Gupta, X Qin, Q Wang, J Cowart, H Huang, CH Wu… - bioRxiv, 2023 - biorxiv.org
Alzheimer's disease and related dementias (AD/ADRDs) are among the most common forms
of dementia, and yet no effective treatments have been developed. To gain insight into the …

[图书][B] Extraction of knowledge for micrornas and genes: extracting connections through association, involvement, and regulation

S Gupta - 2021 - search.proquest.com
Biological entities such as genes, proteins, and microRNAs are critical players in various
biological processes and diseases. The role of these entities on biological processes and …

Reusing label functions to extract multiple types of biomedical relationships from biomedical abstracts at scale

DN Nicholson, DS Himmelstein, CS Greene - bioRxiv, 2019 - biorxiv.org
Abstract Knowledge bases support multiple research efforts such as providing contextual
information for biomedical entities, constructing networks, and supporting the interpretation …