Soil-on-a-Chip: microfluidic platforms for environmental organismal studies

CE Stanley, G Grossmann, XC i Solvas, AJ deMello - Lab on a Chip, 2016 - pubs.rsc.org
Soil is the habitat of countless organisms and encompasses an enormous variety of dynamic
environmental conditions. While it is evident that a thorough understanding of how …

Live cell microscopy: From image to insight

AP Cuny, FP Schlottmann, JC Ewald, S Pelet… - Biophysics …, 2022 - pubs.aip.org
Live-cell microscopy is a powerful tool that can reveal cellular behavior as well as the
underlying molecular processes. A key advantage of microscopy is that by visualizing …

Attention-based transformers for instance segmentation of cells in microstructures

T Prangemeier, C Reich… - 2020 IEEE International …, 2020 - ieeexplore.ieee.org
Detecting and segmenting object instances is a common task in biomedical applications.
Examples range from detecting lesions on functional magnetic resonance images, to the …

Protein biogenesis machinery is a driver of replicative aging in yeast

GE Janssens, AC Meinema, J Gonzalez, JC Wolters… - elife, 2015 - elifesciences.org
An integrated account of the molecular changes occurring during the process of cellular
aging is crucial towards understanding the underlying mechanisms. Here, using novel …

High-throughput analysis of yeast replicative aging using a microfluidic system

MC Jo, W Liu, L Gu, W Dang… - Proceedings of the …, 2015 - National Acad Sciences
Saccharomyces cerevisiae has been an important model for studying the molecular
mechanisms of aging in eukaryotic cells. However, the laborious and low-throughput …

Age-dependent deterioration of nuclear pore assembly in mitotic cells decreases transport dynamics

IL Rempel, MM Crane, DJ Thaller, A Mishra… - Elife, 2019 - elifesciences.org
Nuclear transport is facilitated by the Nuclear Pore Complex (NPC) and is essential for life in
eukaryotes. The NPC is a long-lived and exceptionally large structure. We asked whether …

[HTML][HTML] Evidence for the hallmarks of human aging in replicatively aging yeast

GE Janssens, LM Veenhoff - Microbial Cell, 2016 - ncbi.nlm.nih.gov
Recently, efforts have been made to characterize the hallmarks that accompany and
contribute to the phenomenon of aging, as most relevant for humans 1. Remarkably …

High-throughput microfluidics to control and measure signaling dynamics in single yeast cells

AS Hansen, N Hao, EK O'shea - Nature protocols, 2015 - nature.com
Microfluidics coupled to quantitative time-lapse fluorescence microscopy is transforming our
ability to control, measure and understand signaling dynamics in single living cells. Here we …

Frequency domain analysis of fluctuations of mRNA and protein copy numbers within a cell lineage: theory and experimental validation

C Jia, R Grima - Physical Review X, 2021 - APS
The stochasticity of gene expression is manifested in the fluctuations of messenger
ribonucleic acid and protein copy numbers within a cell lineage over time. While data of this …

Multigenerational silencing dynamics control cell aging

Y Li, M Jin, R O'Laughlin, P Bittihn… - Proceedings of the …, 2017 - National Acad Sciences
Cellular aging plays an important role in many diseases, such as cancers, metabolic
syndromes, and neurodegenerative disorders. There has been steady progress in …