A survey on deep learning in medical image registration: New technologies, uncertainty, evaluation metrics, and beyond

J Chen, Y Liu, S Wei, Z Bian, S Subramanian… - Medical Image …, 2024 - Elsevier
Deep learning technologies have dramatically reshaped the field of medical image
registration over the past decade. The initial developments, such as regression-based and U …

Deep label fusion: A generalizable hybrid multi-atlas and deep convolutional neural network for medical image segmentation

L Xie, LEM Wisse, J Wang, S Ravikumar… - Medical image …, 2023 - Elsevier
Deep convolutional neural networks (DCNN) achieve very high accuracy in segmenting
various anatomical structures in medical images but often suffer from relatively poor …

Local temperature scaling for probability calibration

Z Ding, X Han, P Liu… - Proceedings of the IEEE …, 2021 - openaccess.thecvf.com
For semantic segmentation, label probabilities are often uncalibrated as they are typically
only the by-product of a segmentation task. Intersection over Union (IoU) and Dice score are …

Cross-modality multi-atlas segmentation using deep neural networks

W Ding, L Li, X Zhuang, L Huang - International Conference on Medical …, 2020 - Springer
Both image registration and label fusion in the multi-atlas segmentation (MAS) rely on the
intensity similarity between target and atlas images. However, such similarity can be …

Cross-modality multi-atlas segmentation via deep registration and label fusion

W Ding, L Li, X Zhuang, L Huang - IEEE Journal of Biomedical …, 2022 - ieeexplore.ieee.org
Multi-atlas segmentation (MAS) is a promising framework for medical image segmentation.
Generally, MAS methods register multiple atlases, ie, medical images with corresponding …

VoteNet+: An improved deep learning label fusion method for multi-atlas segmentation

Z Ding, X Han, M Niethammer - 2020 IEEE 17th International …, 2020 - ieeexplore.ieee.org
In this work, we improve the performance of multi-atlas segmentation (MAS) by integrating
the recently proposed VoteNet model with the joint label fusion (JLF) approach. Specifically …

Regional deep atrophy: Using temporal information to automatically identify regions associated with Alzheimer's disease progression from longitudinal MRI

M Dong, L Xie, SR Das, J Wang, LEM Wisse… - Imaging …, 2024 - direct.mit.edu
Longitudinal assessment of brain atrophy, particularly in the hippocampus, is a well-studied
biomarker for neurodegenerative diseases, such as Alzheimer's disease (AD). Estimating …

Votenet++: Registration refinement for multi-atlas segmentation

Z Ding, M Niethammer - 2021 IEEE 18th International …, 2021 - ieeexplore.ieee.org
Multi-atlas segmentation (MAS) is a popular image segmentation technique for medical
images. In this work, we improve the performance of MAS by correcting registration errors …

[HTML][HTML] Regional Deep Atrophy: a Self-Supervised Learning Method to Automatically Identify Regions Associated With Alzheimer's Disease Progression From …

M Dong, L Xie, SR Das, J Wang, LEM Wisse… - ArXiv, 2023 - ncbi.nlm.nih.gov
Longitudinal assessment of brain atrophy, particularly in the hippocampus, is a well-studied
biomarker for neurodegenerative diseases, such as Alzheimer's disease (AD). In clinical …

Deep label fusion: a 3D end-to-end hybrid multi-atlas segmentation and deep learning pipeline

L Xie, LEM Wisse, J Wang, S Ravikumar… - … Processing in Medical …, 2021 - Springer
Deep learning (DL) is the state-of-the-art methodology in various medical image
segmentation tasks. However, it requires relatively large amounts of manually labeled …