B Song, F Li, Y Liu, X Zeng - Briefings in Bioinformatics, 2021 - academic.oup.com
The biomedical literature is growing rapidly, and the extraction of meaningful information from the large amount of literature is increasingly important. Biomedical named entity …
Q Chen, A Allot, Z Lu - Nucleic acids research, 2021 - academic.oup.com
Since the outbreak of the current pandemic in 2020, there has been a rapid growth of published articles on COVID-19 and SARS-CoV-2, with about 10 000 new articles added …
Biomedical literature is growing rapidly, making it challenging to curate and extract knowledge manually. Biomedical natural language processing (BioNLP) techniques that …
A wide variety of symptoms is associated with Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) infection, and these symptoms can overlap with other …
Motivation: The scientific literature embeds an enormous amount of relational knowledge, encompassing interactions between biomedical entities, like proteins, drugs, and symptoms …
There has been significant recent progress in leveraging large-scale gene expression data to develop foundation models for single-cell biology. Models such as Geneformer and …
Transformer-based neural language models have led to breakthroughs for a variety of natural language processing (NLP) tasks. However, most models are pretrained on general …
Pretrained language models such as Bidirectional Encoder Representations from Transformers (BERT) have achieved state-of-the-art performance in natural language …
Accurate prediction of cardiovascular disease (CVD) requires multifaceted information consisting of not only a patient's medical history, but genomic data, symptoms, lifestyle, and …