Principles of genetic circuit design

JAN Brophy, CA Voigt - Nature methods, 2014 - nature.com
Cells navigate environments, communicate and build complex patterns by initiating gene
expression in response to specific signals. Engineers seek to harness this capability to …

Mechanisms of site-specific recombination

NDF Grindley, KL Whiteson, PA Rice - Annu. Rev. Biochem., 2006 - annualreviews.org
Integration, excision, and inversion of defined DNA segments commonly occur through site-
specific recombination, a process of DNA breakage and reunion that requires no DNA …

[图书][B] Evolution: a view from the 21st century

JA Shapiro - 2011 - books.google.com
James A. Shapiro proposes an important new paradigm for understanding biological
evolution, the core organizing principle of biology. Shapiro introduces crucial new molecular …

Diversity in the serine recombinases

MCM Smith, HM Thorpe - Molecular microbiology, 2002 - Wiley Online Library
Most site‐specific recombinases fall into one of two families, based on evolutionary and
mechanistic relatedness. These are the tyrosine recombinases or λ integrase family and the …

A Structural View of Cre-loxP Site-Specific Recombination

GD Van Duyne - Annual review of biophysics and biomolecular …, 2001 - annualreviews.org
▪ Abstract Structural models of site-specific recombinases from the lambda integrase family
of enzymes have in the last four years provided an important new perspective on the three …

Crystal structure of a Flp recombinase–Holliday junction complex: assembly of an active oligomer by helix swapping

Y Chen, U Narendra, LE Iype, MM Cox, PA Rice - Molecular cell, 2000 - cell.com
The crystal structure of a Flp recombinase tetramer bound to a Holliday junction intermediate
has been determined at 2.65 Å resolution. Only one of Flp's two domains, containing the …

Structural basis for broad DNA-specificity in integron recombination

D MacDonald, G Demarre, M Bouvier, D Mazel… - Nature, 2006 - nature.com
Lateral DNA transfer—the movement of genetic traits between bacteria—has a profound
impact on genomic evolution and speciation. The efficiency with which bacteria incorporate …

Xer site specific recombination: double and single recombinase systems

F Castillo, A Benmohamed, G Szatmari - Frontiers in microbiology, 2017 - frontiersin.org
The separation and segregation of newly replicated bacterial chromosomes can be
constrained by the formation of circular chromosome dimers caused by crossing over during …

Integron integrases possess a unique additional domain necessary for activity

N Messier, PH Roy - Journal of bacteriology, 2001 - Am Soc Microbiol
Integrons are genetic elements capable of integrating genes by a site-specific recombination
system catalyzed by an integrase. Integron integrases are members of the tyrosine …

ResT, a telomere resolvase encoded by the Lyme disease spirochete

K Kobryn, G Chaconas - Molecular cell, 2002 - cell.com
The genus Borrelia includes the causative agents of Lyme disease and relapsing fever. An
unusual feature of these bacteria is a segmented genome consisting mostly of a number of …