Ribosomal ITS sequences and plant phylogenetic inference
One of the most popular sequences for phylogenetic inference at the generic and
infrageneric levels in plants is the internal transcribed spacer (ITS) region of the 18S–5.8 S …
infrageneric levels in plants is the internal transcribed spacer (ITS) region of the 18S–5.8 S …
Thirteen Camelliachloroplast genome sequences determined by high-throughput sequencing: genome structure and phylogenetic relationships
Background Camellia is an economically and phylogenetically important genus in the family
Theaceae. Owing to numerous hybridization and polyploidization, it is taxonomically and …
Theaceae. Owing to numerous hybridization and polyploidization, it is taxonomically and …
Recent trends in molecular phylogenetic analysis: where to next?
The acquisition of large multilocus sequence data is providing researchers with an
unprecedented amount of information to resolve difficult phylogenetic problems. With these …
unprecedented amount of information to resolve difficult phylogenetic problems. With these …
SeqState: primer design and sequence statistics for phylogenetic DNA datasets
K Müller - Applied bioinformatics, 2005 - Springer
Choosing and designing primers based on available DNA sequence data and statistical
contrasting of domains or structural features is a common routine among molecular …
contrasting of domains or structural features is a common routine among molecular …
A comprehensive phylogeny of the bumble bees (Bombus)
SA Cameron, HM Hines… - Biological journal of the …, 2007 - academic.oup.com
Abstract Bumble bees (Bombus Latreille) occupy a wide diversity of habitats, from alpine
meadows to lowland tropical forest, yet they appear to be similar in morphology throughout …
meadows to lowland tropical forest, yet they appear to be similar in morphology throughout …
Diversification and biogeography of Juniperus (Cupressaceae): variable diversification rates and multiple intercontinental dispersals
A central aim of biogeography is to understand when and how modern patterns of species
diversity and distribution developed. Many plant groups have disjunct distributions within the …
diversity and distribution developed. Many plant groups have disjunct distributions within the …
Molecular phylogenetics of Squamata: the position of snakes, amphisbaenians, and dibamids, and the root of the squamate tree
TM Townsend, A Larson, E Louis… - Systematic biology, 2004 - academic.oup.com
Squamate reptiles (snakes, lizards, and amphisbaenians) serve as model systems for
evolutionary studies of a variety of morphological and behavioral traits, and phylogeny is …
evolutionary studies of a variety of morphological and behavioral traits, and phylogeny is …
GapCoder automates the use of indel characters in phylogenetic analysis
ND Young, J Healy - BMC bioinformatics, 2003 - Springer
Background Several ways of incorporating indels into phylogenetic analysis have been
suggested. Simple indel coding has two strengths:(1) biological realism and (2) efficiency of …
suggested. Simple indel coding has two strengths:(1) biological realism and (2) efficiency of …
Mutational dynamics and phylogenetic utility of noncoding chloroplast DNA
Introns and spacers are a rich and well-appreciated information source for evolutionary
studies in plants. Compared to coding sequences, the mutational dynamics of introns and …
studies in plants. Compared to coding sequences, the mutational dynamics of introns and …
Incorporating information from length-mutational events into phylogenetic analysis
K Müller - Molecular phylogenetics and evolution, 2006 - Elsevier
With the growing number of phylogenetic studies that use length variable DNA sequences,
incorporating information from length-mutational events into phylogenetic analysis is …
incorporating information from length-mutational events into phylogenetic analysis is …