Precision medicine in complex diseases—Molecular subgrouping for improved prediction and treatment stratification

Å Johansson, OA Andreassen, S Brunak… - Journal of internal …, 2023 - Wiley Online Library
Complex diseases are caused by a combination of genetic, lifestyle, and environmental
factors and comprise common noncommunicable diseases, including allergies …

Genome interpretation using in silico predictors of variant impact

P Katsonis, K Wilhelm, A Williams, O Lichtarge - Human genetics, 2022 - Springer
Estimating the effects of variants found in disease driver genes opens the door to
personalized therapeutic opportunities. Clinical associations and laboratory experiments …

[HTML][HTML] Exonic trinucleotide repeat expansions in ZFHX3 cause spinocerebellar ataxia type 4: A poly-glycine disease

J Wallenius, E Kafantari, E Jhaveri, S Gorcenco… - The American Journal of …, 2024 - cell.com
Autosomal-dominant ataxia with sensory and autonomic neuropathy is a highly specific
combined phenotype that we described in two Swedish kindreds in 2014; its genetic cause …

Frequencies of clinically important CYP2C19 and CYP2D6 alleles are graded across Europe

J Petrović, V Pešić, VM Lauschke - European journal of human genetics, 2020 - nature.com
Abstract CYP2C19 and CYP2D6 are important drug-metabolizing enzymes that are involved
in the metabolism of around 30% of all medications. Importantly, the corresponding genes …

[HTML][HTML] Sarek: A portable workflow for whole-genome sequencing analysis of germline and somatic variants

M Garcia, S Juhos, M Larsson, PI Olason… - …, 2020 - ncbi.nlm.nih.gov
Whole-genome sequencing (WGS) is a fundamental technology for research to advance
precision medicine, but the limited availability of portable and user-friendly workflows for …

Evolution from adherent to suspension: systems biology of HEK293 cell line development

M Malm, R Saghaleyni, M Lundqvist, M Giudici… - Scientific reports, 2020 - nature.com
The need for new safe and efficacious therapies has led to an increased focus on biologics
produced in mammalian cells. The human cell line HEK293 has bio-synthetic potential for …

The Swedish Twin Registry: content and management as a research infrastructure

U Zagai, P Lichtenstein, NL Pedersen… - Twin research and …, 2019 - cambridge.org
The Swedish Twin Registry functions as research infrastructure containing information on
216,258 twins born between 1886 and 2015, of whom 86,199 pairs have zygosity …

Origin matters: Using a local reference genome improves measures in population genomics

DMJ Thorburn, K Sagonas… - Molecular ecology …, 2023 - Wiley Online Library
Genome sequencing enables answering fundamental questions about the genetic basis of
adaptation, population structure and epigenetic mechanisms. Yet, we usually need a …

Causal effects of inflammatory protein biomarkers on inflammatory diseases

WE Ek, T Karlsson, J Höglund, M Rask-Andersen… - Science …, 2021 - science.org
Many circulating proteins are associated with the presence or severity of disease. However,
whether these protein biomarkers are causal for disease development is usually unknown …

Increased burden of ultra-rare structural variants localizing to boundaries of topologically associated domains in schizophrenia

M Halvorsen, R Huh, N Oskolkov, J Wen… - Nature …, 2020 - nature.com
Despite considerable progress in schizophrenia genetics, most findings have been for large
rare structural variants and common variants in well-imputed regions with few genes …