[HTML][HTML] From bench to bedside: Single-cell analysis for cancer immunotherapy

EF Davis-Marcisak, A Deshpande, GL Stein-O'Brien… - Cancer cell, 2021 - cell.com
Single-cell technologies are emerging as powerful tools for cancer research. These
technologies characterize the molecular state of each cell within a tumor, enabling new …

[HTML][HTML] Evolution of metastasis: new tools and insights

P Gui, TG Bivona - Trends in Cancer, 2022 - cell.com
Metastasis is an evolutionary process occurring across multiple organs and timescales. Due
to its continuous and dynamic nature, this multifaceted process has been challenging to …

[HTML][HTML] Single-cell delineation of lineage and genetic identity in the mouse brain

RC Bandler, I Vitali, RN Delgado, MC Ho… - Nature, 2022 - nature.com
During neurogenesis, mitotic progenitor cells lining the ventricles of the embryonic mouse
brain undergo their final rounds of cell division, giving rise to a wide spectrum of postmitotic …

An oncogenic phenoscape of colonic stem cell polarization

X Qin, FC Rodriguez, J Sufi, P Vlckova, J Claus… - Cell, 2023 - cell.com
Cancer cells are regulated by oncogenic mutations and microenvironmental signals, yet
these processes are often studied separately. To functionally map how cell-intrinsic and cell …

Temporal dynamics and heterogeneity of cell populations during skeletal muscle regeneration

SN Oprescu, F Yue, J Qiu, LF Brito, S Kuang - IScience, 2020 - cell.com
Mammalian skeletal muscle possesses a unique ability to regenerate, which is primarily
mediated by a population of resident muscle stem cells (MuSCs) and requires a concerted …

Multifunctional barcoding with ClonMapper enables high-resolution study of clonal dynamics during tumor evolution and treatment

C Gutierrez, AM Al'Khafaji, E Brenner, KE Johnson… - Nature Cancer, 2021 - nature.com
Lineage-tracing methods have enabled characterization of clonal dynamics in complex
populations, but generally lack the ability to integrate genomic, epigenomic and …

Single-cell lineage capture across genomic modalities with CellTag-multi reveals fate-specific gene regulatory changes

K Jindal, MT Adil, N Yamaguchi, X Yang… - Nature …, 2023 - nature.com
Complex gene regulatory mechanisms underlie differentiation and reprogramming.
Contemporary single-cell lineage-tracing (scLT) methods use expressed, heritable DNA …

Next-generation lineage tracing and fate mapping to interrogate development

S VanHorn, SA Morris - Developmental cell, 2021 - cell.com
Lineage tracing and fate mapping, overlapping yet distinct disciplines to follow cells and
their progeny, have evolved rapidly over the last century. Lineage tracing aims to identify all …

Connecting past and present: single-cell lineage tracing

C Chen, Y Liao, G Peng - Protein & Cell, 2022 - academic.oup.com
Central to the core principle of cell theory, depicting cells' history, state and fate is a
fundamental goal in modern biology. By leveraging clonal analysis and single-cell RNA-seq …

Generation and biobanking of patient-derived glioblastoma organoids and their application in CAR T cell testing

F Jacob, G Ming, H Song - Nature protocols, 2020 - nature.com
Glioblastoma tumors exhibit extensive inter-and intratumoral heterogeneity, which has
contributed to the poor outcomes of numerous clinical trials and continues to complicate the …