[HTML][HTML] Subcellular Drug Distribution: Exploring Organelle-Specific Characteristics for Enhanced Therapeutic Efficacy

X Liu, M Li, S Woo - Pharmaceutics, 2024 - mdpi.com
The efficacy and potential toxicity of drug treatments depends on the drug concentration at
its site of action, intricately linked to its distribution within diverse organelles of mammalian …

Robust parameter estimation and identifiability analysis with hybrid neural ordinary differential equations in computational biology

S Giampiccolo, F Reali, A Fochesato, G Iacca… - NPJ Systems Biology …, 2024 - nature.com
Parameter estimation is one of the central challenges in computational biology. In this paper,
we present an approach to estimate model parameters and assess their identifiability in …

Bridging pharmacology and neural networks: A deep dive into neural ordinary differential equations

IB Losada, N Terranova - CPT: Pharmacometrics & Systems …, 2024 - Wiley Online Library
The advent of machine learning has led to innovative approaches in dealing with clinical
data. Among these, Neural Ordinary Differential Equations (Neural ODEs), hybrid models …

Machine learning approach in dosage individualization of isoniazid for tuberculosis

BH Tang, XF Zhang, SM Fu, BF Yao, W Zhang… - Clinical …, 2024 - Springer
Introduction Isoniazid is a first-line antituberculosis agent with high variability, which would
profit from individualized dosing. Concentrations of isoniazid at 2 h (C2h), as an indicator of …

Applying Neural ODEs to Derive a Mechanism‐Based Model for Characterizing Maturation‐Related Serum Creatinine Dynamics in Preterm Newborns

DS Bräm, G Koch, K Allegaert… - The Journal of …, 2024 - Wiley Online Library
Serum creatinine in neonates follows complex dynamics due to maturation processes, most
pronounced in the first few weeks of life. The development of a mechanism‐based model …

Applying neural ordinary differential equations for analysis of hormone dynamics in Trier Social Stress Tests

C Parker, E Nelson, T Zhang - Frontiers in Genetics, 2024 - frontiersin.org
Introduction: This study explores using Neural Ordinary Differential Equations (NODEs) to
analyze hormone dynamics in the hypothalamicpituitary-adrenal (HPA) axis during Trier …

Low‐dimensional neural ordinary differential equations accounting for inter‐individual variability implemented in Monolix and NONMEM

DS Bräm, B Steiert, M Pfister… - CPT: Pharmacometrics …, 2025 - Wiley Online Library
Neural ordinary differential equations (NODEs) are an emerging machine learning (ML)
method to model pharmacometric (PMX) data. Combining mechanism‐based components …

On inductive biases for the robust and interpretable prediction of drug concentrations using deep compartment models

A Janssen, FC Bennis, MH Cnossen… - … of Pharmacokinetics and …, 2024 - Springer
Conventional pharmacokinetic (PK) models contain several useful inductive biases guiding
model convergence to more realistic predictions of drug concentrations. Implementing …

Mixed effect estimation in deep compartment models: Variational methods outperform first-order approximations

A Janssen, FC Bennis, MH Cnossen… - … of Pharmacokinetics and …, 2024 - Springer
This work focusses on extending the deep compartment model (DCM) framework to the
estimation of mixed-effects. By introducing random effects, model predictions can be …

Learning and Current Prediction of PMSM Drive via Differential Neural Networks

W Mei, X Wang, Y Lu, K Yu, S Li - IEEE Transactions on …, 2025 - ieeexplore.ieee.org
Learning models for dynamical systems in continuous time is significant for understanding
complex phenomena and making accurate predictions. This study presents a novel …