Enriching the future of public health microbiology with hybridization bait capture

MS Beaudry, MIU Bhuiyan… - Clinical Microbiology …, 2024 - journals.asm.org
Public health microbiology focuses on microorganisms and infectious agents that impact
human health. For years, this field has relied on culture or molecular methods to investigate …

Pathogen Discovery in the Post-COVID Era

C Guo, JY Wu - Pathogens, 2024 - mdpi.com
Pathogen discovery plays a crucial role in the fields of infectious diseases, clinical
microbiology, and public health. During the past four years, the global response to the …

Capturing the resistome: a targeted capture method to reveal antibiotic resistance determinants in metagenomes

AK Guitor, AR Raphenya, J Klunk, M Kuch… - Antimicrobial agents …, 2019 - Am Soc Microbiol
Identification of the nucleotide sequences encoding antibiotic resistance elements and
determination of their association with antibiotic resistance are critical to improve …

Multiplexed target enrichment enables efficient and in-depth analysis of antimicrobial resistome in metagenomes

Y Li, X Shi, Y Zuo, T Li, L Liu, Z Shen, J Shen… - Microbiology …, 2022 - Am Soc Microbiol
Antibiotic resistance genes (ARGs) pose a serious threat to public health and ecological
security in the 21st century. However, the resistome only accounts for a tiny fraction of …

Towards a rapid-turnaround low-depth unbiased metagenomics sequencing workflow on the Illumina platforms

WLC Koh, SE Poh, CK Lee, THM Chan, G Yan… - Bioengineering, 2023 - mdpi.com
Unbiased metagenomic sequencing is conceptually well-suited for first-line diagnosis as all
known and unknown infectious entities can be detected, but costs, turnaround time and …

Using targeted next-generation sequencing to diagnose severe pneumonia due to Tropheryma Whipplei and Human Metapneumovirus: a case report and literature …

F Liu, XY Yang, Z He, C OuYang, X Yang… - Infection and Drug …, 2024 - Taylor & Francis
Background In addition to the well-known Whipple's disease (WD), Tropheryma Whipplei
(TW) can also lead to acute pneumonia. There is no unified consensus on the susceptible …

Genome-based targeted sequencing as a reproducible microbial community profiling assay

J Benjamino, B Leopold, D Phillips, MD Adams - Msphere, 2021 - Am Soc Microbiol
Current sequencing-based methods for profiling microbial communities rely on marker gene
(eg, 16S rRNA) or metagenome shotgun sequencing (mWGS) analysis. We present an …

A Retrospective Analysis of Ebola Virus Disease in Liberia

MJ Matson - 2022 - search.proquest.com
The outbreak of Ebola virus disease (EVD) centered in the West African countries of Guinea,
Liberia, and Sierra Leone from 2013-2016 was the longest and largest such outbreak on …

[HTML][HTML] APPLICATION OF THE NEXT GENERATION SEQUENCING IN BIOLOGY AND MEDICINE

АП Герілович, МІ Сушко, СС Мандигра… - One Health …, 2024 - onehealthjournal.org.ua
Анотація Секвенування нового покоління (NGS), також відоме як високопродуктивне
секвенування, відноситься до низки сучасних технологій секвенування ДНК, які зробили …

Development and evaluation of rapid methods for diagnosis of prosthetic joint infection

A Trotter - 2021 - ueaeprints.uea.ac.uk
Prosthetic joint infection (PJI) is a devastating complication of total joint replacement
resulting in severe pain, functional impairment and high mortality. While a small minority of …