RNA biogenesis and RNA metabolism factors as R-loop suppressors: a hidden role in genome integrity

R Luna, B Gómez-González… - Genes & …, 2024 - genesdev.cshlp.org
Genome integrity relies on the accuracy of DNA metabolism, but as appreciated for more
than four decades, transcription enhances mutation and recombination frequencies. More …

[HTML][HTML] Helicases in R-loop formation and resolution

S Yang, L Winstone, S Mondal, Y Wu - Journal of Biological Chemistry, 2023 - Elsevier
With the development and wide usage of CRISPR technology, the presence of R-loop
structures, which consist of an RNA: DNA hybrid and a displaced single strand (ss) DNA …

RNA polymerase II associates with active genes during DNA replication

TK Fenstermaker, S Petruk, SK Kovermann, HW Brock… - Nature, 2023 - nature.com
The transcriptional machinery is thought to dissociate from DNA during replication. Certain
proteins, termed epigenetic marks, must be transferred from parent to daughter DNA strands …

Bacterial homologs of innate eukaryotic antiviral defenses with anti-phage activity highlight shared evolutionary roots of viral defenses

DF van den Berg, AR Costa, JQ Esser, I Stanciu… - Cell Host & Microbe, 2024 - cell.com
Prokaryotes have evolved a multitude of defense systems to protect against phage
predation. Some of these resemble eukaryotic genes involved in antiviral responses. Here …

YTHDC1 m6A-dependent and m6A-independent functions converge to preserve the DNA damage response

D Elvira-Blázquez, JM Fernández-Justel… - The EMBO …, 2024 - embopress.org
Cells have evolved a robust and highly regulated DNA damage response to preserve their
genomic integrity. Although increasing evidence highlights the relevance of RNA regulation …

RNF8 ubiquitylation of XRN2 facilitates R-loop resolution and restrains genomic instability in BRCA1 mutant cells

R Krishnan, M Lapierre, B Gautreau… - Nucleic Acids …, 2023 - academic.oup.com
Breast cancer linked with BRCA1/2 mutations commonly recur and resist current therapies,
including PARP inhibitors. Given the lack of effective targeted therapies for BRCA1-mutant …

Senataxin RNA/DNA helicase promotes replication restart at co-transcriptional R-loops to prevent MUS81-dependent fork degradation

S Rao, M Andrs, K Shukla, E Isik, C König… - Nucleic Acids …, 2024 - academic.oup.com
Replication forks stalled at co-transcriptional R-loops can be restarted by a mechanism
involving fork cleavage-religation cycles mediated by MUS81 endonuclease and DNA …

[HTML][HTML] Mechanisms of RNA Polymerase II termination at the 3'-end of genes

DL Martinez, JQ Svejstrup - Journal of Molecular Biology, 2024 - Elsevier
Abstract RNA polymerase II (RNAPII) is responsible for the synthesis of a diverse set of RNA
molecules, including protein-coding messenger RNAs (mRNAs) and many short non-coding …

Role of senataxin in R-loop-mediated neurodegeneration

A Kannan, S Gangadharan Leela… - Brain …, 2024 - academic.oup.com
Senataxin is an RNA: DNA helicase that plays an important role in the resolution of RNA:
DNA hybrids (R-loops) formed during transcription. R-loops are involved in the regulation of …

R-loop and diseases: the cell cycle matters

Y Xu, Y Jiao, C Liu, R Miao, C Liu, Y Wang, C Ma… - Molecular Cancer, 2024 - Springer
The cell cycle is a crucial biological process that is involved in cell growth, development, and
reproduction. It can be divided into G1, S, G2, and M phases, and each period is closely …