[HTML][HTML] FunPred 3.0: improved protein function prediction using protein interaction network

S Saha, P Chatterjee, S Basu, M Nasipuri… - PeerJ, 2019 - peerj.com
Proteins are the most versatile macromolecules in living systems and perform crucial
biological functions. In the advent of the post-genomic era, the next generation sequencing …

Protein function prediction from protein–protein interaction network using gene ontology based neighborhood analysis and physico-chemical features

S Saha, A Prasad, P Chatterjee, S Basu… - … of Bioinformatics and …, 2018 - World Scientific
Protein Function Prediction from Protein–Protein Interaction Network (PPIN) and physico-
chemical features using the Gene Ontology (GO) classification are indeed very useful for …

[PDF][PDF] Cluster analysis technique based on bipartite graph for human protein class prediction

M Singh, G Singh - International Journal of Computer Applications, 2011 - Citeseer
In the present paper, the cluster analysis as a form of unsupervised learning is implemented
for human protein class prediction. The data related to human protein is accessed from …

Models for anti-inflammatory activity of 8-substituted-4-anilino-6-aminoquinoline-3-carbonitriles

RK Goyal, H Dureja, G Singh, AK Madan - Medicinal Chemistry Research, 2012 - Springer
An in silico approach through decision tree (DT) and moving average analysis (MAA) has
been employed for development of models for prediction of anti-inflammatory activity. A data …

Fourth generation detour matrix-based topological indices for QSAR/QSPR–Part-1: development and evaluation

RK Marwaha, H Jangra, KC Das… - … Biology and Drug …, 2012 - inderscienceonline.com
Fourth generation detour matrix-based topological indices for QSAR/QSPR – Part-1:
development and evaluation Page 1 Int. J. Computational Biology and Drug Design, Vol. 5, Nos …

[PDF][PDF] An empirical study on gene, prediction techniques

M Pradhan - academia.edu
In recent times, bioinformatics plays an increasingly important role in the study of advanced
biology. Bioinformatics deals with the management and analysis of biological information …

A Game Theoretic Flavoured Decision Tree for Classification

MA Suciu, RI Lung - … Conference on Machine Learning, Optimization, and …, 2022 - Springer
A game theoretic flavoured decision tree is designed for multi-class classification. Node data
is split by using a game between sub-nodes that try to minimize their entropy. The splitting …

Fourth generation detour matrix-based topological descriptors for QSAR/QSPR–Part-2: application in development of models for prediction of biological activity

RK Marwaha, AK Madan - International Journal of …, 2014 - inderscienceonline.com
Augmented path eccentric connectivity topochemical indices (reported in part-1 of the
manuscript) along with 42 diverse non-correlating molecular descriptors (shortlisted from a …

[PDF][PDF] Development of Predictor for Sequence Derived Features from Amino Acid Sequence using Associate Rule Mining

M Singh, G Singh - International Journal of Computer Science and Security …, 2011 - Citeseer
Drug Discovery process include target identification ie to identify a target protein whose
inhibition can destroy the pathogen. In testing phase, clinical and pre-clinical trials are done …

Stability of different feature selection methods for selecting protein sequence descriptors in protein solubility classification problem

S Kocbek, G Stiglic, I Pernek… - 2010 IEEE 23rd …, 2010 - ieeexplore.ieee.org
Predicting protein solubility has gained lots of intention in the recent years and several
descriptors have been defined to describe proteins in these works. Therefore, different …