New toxins homologous to ParE belonging to three‐component toxin–antitoxin systems in Escherichia coli O157:H7

R Hallez, D Geeraerts, Y Sterckx, N Mine… - Molecular …, 2010 - Wiley Online Library
Type II toxin–antitoxin (TA) systems are considered as protein pairs in which a specific toxin
is associated with a specific antitoxin. We have identified a novel antitoxin family (paaA) that …

Bistable expression of a toxin-antitoxin system located in a cryptic prophage of Escherichia coli O157: H7

D Jurėnas, N Fraikin, F Goormaghtigh, P De Bruyn… - Mbio, 2021 - Am Soc Microbiol
Type II toxin-antitoxin (TA) systems are classically composed of two genes that encode a
toxic protein and a cognate antitoxin protein. Both genes are organized in an operon whose …

A unique hetero-hexadecameric architecture displayed by the Escherichia coli O157 PaaA2–ParE2 antitoxin–toxin complex

YGJ Sterckx, T Jové, AV Shkumatov… - Journal of Molecular …, 2016 - Elsevier
Many bacterial pathogens modulate their metabolic activity, virulence and pathogenicity
through so-called “toxin–antitoxin”(TA) modules. The genome of the human pathogen …

Nanobody-aided crystallization of the transcription regulator PaaR2 from Escherichia coli O157: H7

P De Bruyn, M Prolič-Kalinšek… - … Section F: Structural …, 2021 - journals.iucr.org
paaR2–paaA2–parE2 is a three-component toxin–antitoxin module found in prophage CP-
993P of Escherichia coli O157: H7. Transcription regulation of this module occurs via the …

Changes of Conformation in Albumin with Temperature by Molecular Dynamics Simulations

P Weber, P Bełdowski, K Domino, D Ledziński… - Entropy, 2020 - mdpi.com
This work presents the analysis of the conformation of albumin in the temperature range of
300 K–312 K, ie, in the physiological range. Using molecular dynamics simulations, we …

1H, 13C, and 15N backbone and side chain chemical shift assignment of YdaS, a monomeric member of the HigA family

M Prolič-Kalinšek, P De Bruyn, D Jurėnas… - Biomolecular NMR …, 2020 - Springer
The cryptic prophage CP-933P in Escherichia coli O157: H7 contains a parDE-like toxin–
antitoxin module, the operator region of which is recognized by two flanking transcription …

[PDF][PDF] 384. ISSN 2053-230X

P De Bruyn, M Prolič-Kalinšek, A Vandervelde - biblio.vub.ac.be
VIB, Pleinlaan 2, 1050 Brussels, Belgium, cLaboratory of Medical Biochemistry (LMB) and
the Infla-Med Centre of Excellence, University of Antwerp, Universiteitsplein 1, 2610 Wilrijk …

Interaction and Entanglement of a Pair of Quantum Emitters near a Nanoparticle: Analysis beyond Electric-Dipole Approximation

M Kosik, K Słowik - Entropy, 2020 - mdpi.com
In this paper, we study the collective effects which appear as a pair of quantum emitters is
positioned in close vicinity to a plasmonic nanoparticle. These effects include multipole …

[PDF][PDF] Maruša Prolič-Kalinšek, Pieter De Bruyn, Dukas Jurėnas, Laurence Van Melderen, Remy Loris & Alexander

N Volkov - dipot.ulb.ac.be
The cryptic prophage CP-933P in Escherichia coli O157: H7 contains a parDE-like toxin–
antitoxin module, the operator region of which is recognized by two flanking transcription …

[PDF][PDF] Changes of Conformation in Albumin with Temperature by Molecular Dynamics Simulations

A Gadomski - Condensed-Matter-Principia Based Information & …, 2020 - scholar.archive.org
This work presents the analysis of the conformation of albumin in the temperature range of
300K–312K, ie, in the physiological range. Using molecular dynamics simulations, we …