[HTML][HTML] Live-cell imaging in the deep learning era

JW Pylvänäinen, E Gómez-de-Mariscal… - Current Opinion in Cell …, 2023 - Elsevier
Live imaging is a powerful tool, enabling scientists to observe living organisms in real time.
In particular, when combined with fluorescence microscopy, live imaging allows the …

CellTracksColab is a platform that enables compilation, analysis, and exploration of cell tracking data

E Gómez-de-Mariscal, H Grobe, JW Pylvänäinen… - Plos …, 2024 - journals.plos.org
In life sciences, tracking objects from movies enables researchers to quantify the behavior of
single particles, organelles, bacteria, cells, and even whole animals. While numerous tools …

[HTML][HTML] Artificial intelligence for high content imaging in drug discovery

J Carreras-Puigvert, O Spjuth - Current Opinion in Structural Biology, 2024 - Elsevier
Artificial intelligence (AI) and high-content imaging (HCI) are contributing to advancements
in drug discovery, propelled by the recent progress in deep neural networks. This review …

cellPLATO–an unsupervised method for identifying cell behaviour in heterogeneous cell trajectory data

MJ Shannon, SE Eisman, AR Lowe… - Journal of Cell …, 2024 - journals.biologists.com
Advances in imaging, segmentation and tracking have led to the routine generation of large
and complex microscopy datasets. New tools are required to process this 'phenomics' type …

[HTML][HTML] Label-free spatiotemporal decoding of single-cell fate via acoustic driven 3D tomography

Y Wang, S Zhou, Y Quan, Y Liu, B Zhou, X Chen… - Materials Today Bio, 2024 - Elsevier
Label-free three-dimensional imaging plays a crucial role in unraveling the complexities of
cellular functions and interactions in biomedical research. Conventional single-cell optical …

[HTML][HTML] Lorentz near-field electron ptychography

S You, PH Lu, T Schachinger, A Kovács… - Applied Physics …, 2023 - pubs.aip.org
Over the past few years, electron ptychography has drawn considerable attention for its
ability to recover high contrast and ultra-high resolution images without the need for high …

Facilitating long-term cell examinations and time-lapse recordings in cell biology research with CO2 mini-incubators

A Talebipour, M Saviz, M Vafaiee, R Faraji-Dana - Scientific Reports, 2024 - nature.com
In recent years, microscopy has revolutionized the study of dynamic living cells. However,
performing long-term live cell imaging requires stable environmental conditions such as …

Seeing beyond Labels: Optical Technologies Reshaping Cell Culture Monitoring in Biomedicine

M Charconnet, J Plou - ACS Applied Engineering Materials, 2024 - ACS Publications
Label-free optical technologies have transformed cell culture monitoring, offering
noninvasive alternatives that preserve cellular integrity─ a critical factor in biomedical …

CellTracksColab—A platform for compiling, analyzing, and exploring tracking data

E Gómez-de-Mariscal, H Grobe, JW Pylvänäinen… - bioRxiv, 2023 - biorxiv.org
In life sciences, tracking objects from movies enables researchers to quantify the behavior of
single particles, organelles, bacteria, cells, and even whole animals. While numerous tools …

Exploring the impact of variability in cell segmentation and tracking approaches

L Wiggins, PJ O'Toole… - Microscopy Research …, 2023 - Wiley Online Library
Segmentation and tracking are essential preliminary steps in the analysis of almost all live
cell imaging applications. Although the number of open‐source software systems that …