Viral gastroenteritis in Tocantins, Brazil: characterizing the diversity of human adenovirus F through next-generation sequencing and bioinformatics

R Tahmasebi, A Luchs, K Tardy… - Journal of General …, 2020 - microbiologyresearch.org
Human enteric adenovirus species F (HAdV-F) is one of the most common pathogens
responsible for acute gastroenteritis worldwide. Brazil is a country with continental …

First identification of mammalian orthoreovirus type 3 by gut virome analysis in diarrheic child in Brazil

UA Rosa, GO Ribeiro, F Villanova, A Luchs… - Scientific reports, 2019 - nature.com
Diarrhea remains one of the most common causes of deaths in children. Although many
studies have investigated the prevalence of enteric pathogens around the globe some …

Detection and identification of enteroviruses circulating in children with acute gastroenteritis in Pará State, Northern Brazil (2010–2011)

RS Machado, IP de Sousa, JC Monteiro, JL Ferreira… - Virology Journal, 2020 - Springer
Although acute gastroenteritis (AGE) has been reported as a common infectious disease in
children, there is scarce information about enterovirus (EV) circulating associated with AGE …

Metagenomics applied to the detection of diarrhea viruses in humans: Systematic Review

E dos Santos David, E da Costa Fonseca… - Acta Tropica, 2022 - Elsevier
To analyze the application of the metagenomics method in the identification of viral
infectious agents that lead to diarrhea outbreaks. This study is a systematic review, which …

Guapiaçu virus, a new insect-specific flavivirus isolated from two species of Aedes mosquitoes from Brazil

G de Oliveira Ribeiro, AC da Costa, DE Gill… - Scientific Reports, 2021 - nature.com
Classical insect-flaviviruses (cISFVs) and dual host-related insect-specific flavivirus (dISFV)
are within the major group of insect-specific flavivirus. Remarkably dISFV are evolutionarily …

Composition of eukaryotic viruses and bacteriophages in individuals with acute gastroenteritis

E do Socorro Fôro Ramos, G de Oliveira Ribeiro… - Viruses, 2021 - mdpi.com
Metagenomics based on the next-generation sequencing (NGS) technique is a target-
independent assay that enables the simultaneous detection and genomic characterization of …

Genomic analyses of potential novel recombinant human adenovirus C in Brazil

R Tahmasebi, AC da Costa, K Tardy, R J. Tinker… - Viruses, 2020 - mdpi.com
Human Adenovirus species C (HAdV-C) is the most common etiologic agent of respiratory
disease. In the present study, we characterized the nearly full-length genome of one …

Norovirus strains in patients with acute gastroenteritis in rural and low-income urban areas in northern Brazil

RJ Tinker, AC da Costa, R Tahmasebi, FAP Milagres… - Archives of …, 2021 - Springer
Abstract From 2010-2016, a total of 251 stool samples were screened for norovirus using
next-generation sequencing (NGS) followed by phylogenetic analysis to investigate the …

Multiple clades of Husavirus in South America revealed by next generation sequencing

ESF Ramos, UA Rosa, GO Ribeiro, F Villanova… - PLoS …, 2021 - journals.plos.org
Husavirus (HuV) is an unclassified virus of the order Picornavirales that has already been
identified worldwide in various locations. The genetic, epidemiological, and pathogenic …

Human astrovirus types 1, 4 and 5 circulating among children with acute gastroenteritis in a rural Brazilian state, 2010-2016

A Luchs, K Tardy, R Tahmasebi, SG Morillo… - Archives of …, 2021 - Springer
This study combined conventional epidemiology of human astroviruses. From 2010 to 2016,
232 stool samples from children under 5 years of age were screened using NGS and …