The stringent response and physiological roles of (pp) pGpp in bacteria

SE Irving, NR Choudhury, RM Corrigan - Nature Reviews Microbiology, 2021 - nature.com
The stringent response is a stress signalling system mediated by the alarmones guanosine
tetraphosphate (ppGpp) and guanosine pentaphosphate (pppGpp) in response to nutrient …

How the PhoP/PhoQ System Controls Virulence and Mg2+ Homeostasis: Lessons in Signal Transduction, Pathogenesis, Physiology, and Evolution

EA Groisman, A Duprey, J Choi - Microbiology and Molecular …, 2021 - Am Soc Microbiol
SUMMARY The PhoP/PhoQ two-component system governs virulence, Mg2+ homeostasis,
and resistance to a variety of antimicrobial agents, including acidic pH and cationic …

Genome-wide effects on Escherichia coli transcription from ppGpp binding to its two sites on RNA polymerase

P Sanchez-Vazquez, CN Dewey… - Proceedings of the …, 2019 - National Acad Sciences
The second messenger nucleotide ppGpp dramatically alters gene expression in bacteria to
adjust cellular metabolism to nutrient availability. ppGpp binds to two sites on RNA …

Advances in applying computer-aided drug design for neurodegenerative diseases

MM Salman, Z Al-Obaidi, P Kitchen, A Loreto… - International journal of …, 2021 - mdpi.com
Neurodegenerative diseases (NDs) including Alzheimer's disease, Parkinson's disease,
amyotrophic lateral sclerosis, and Huntington's disease are incurable and affect millions of …

Microbial adaptation to enhance stress tolerance

YS Tan, RK Zhang, ZH Liu, BZ Li, YJ Yuan - Frontiers in Microbiology, 2022 - frontiersin.org
Microbial cell factories have been widely used in the production of various chemicals.
Although synthetic biology is useful in improving the cell factories, adaptation is still widely …

(p) ppGpp: magic modulators of bacterial physiology and metabolism

W Steinchen, V Zegarra, G Bange - Frontiers in Microbiology, 2020 - frontiersin.org
When bacteria experience growth-limiting environmental conditions, the synthesis of the
hyperphosphorylated guanosine derivatives (p) ppGpp is induced by enzymes of the …

An interbacterial toxin inhibits target cell growth by synthesizing (p) ppApp

S Ahmad, B Wang, MD Walker, HKR Tran, PJ Stogios… - Nature, 2019 - nature.com
Bacteria have evolved sophisticated mechanisms to inhibit the growth of competitors. One
such mechanism involves type VI secretion systems, which bacteria can use to inject …

Regulatory themes and variations by the stress-signaling nucleotide alarmones (p) ppGpp in bacteria

BW Anderson, DK Fung, JD Wang - Annual Review of Genetics, 2021 - annualreviews.org
Bacterial stress-signaling alarmones are important components of a protective network
against diverse stresses such as nutrient starvation and antibiotic assault. pppGpp and …

Characterization of Autoinducer-3 Structure and Biosynthesis in E. coli

CS Kim, A Gatsios, S Cuesta, YC Lam, Z Wei… - ACS central …, 2020 - ACS Publications
Escherichia coli is a common inhabitant of the human microbiota and a beacon model
organism in biology. However, an understanding of its signaling systems that regulate …

Coupled transcription-translation in prokaryotes: an old couple with new surprises

M Irastortza-Olaziregi, O Amster-Choder - Frontiers in Microbiology, 2021 - frontiersin.org
Coupled transcription-translation (CTT) is a hallmark of prokaryotic gene expression. CTT
occurs when ribosomes associate with and initiate translation of mRNAs whose transcription …