The power of computer simulations, including machine‐learning, has become an inseparable part of scientific analysis of biological data. This has significantly impacted the …
T Ginex, C Marco-Marín, M Wieczór, CP Mata… - PLoS …, 2022 - journals.plos.org
The S: A222V point mutation, within the G clade, was characteristic of the 20E (EU1) SARS- CoV-2 variant identified in Spain in early summer 2020. This mutation has since reappeared …
Cyanobacteria, glaucophytes, and rhodophytes utilize giant, light-harvesting phycobilisomes (PBSs) for capturing solar energy and conveying it to photosynthetic reaction centers. PBSs …
Using a new consensus-based image-processing approach together with principal component analysis, the flexibility and conformational dynamics of the SARS-CoV-2 spike in …
In response to improper kinetochore-microtubule attachments in mitosis, the spindle assembly checkpoint (SAC) assembles the mitotic checkpoint complex (MCC) to inhibit the …
An open-source Python library EMDA for cryo-EM map and model manipulation is presented with a specific focus on validation. The use of several functionalities in the library is …
Resolving the structural variability of proteins is often key to understanding the structure– function relationship of those macromolecular machines. Single particle analysis using …
Z Zhu, Z Deng, Q Wang, Y Wang, D Zhang… - Frontiers in …, 2022 - frontiersin.org
Ion channels are expressed in almost all living cells, controlling the in-and-out communications, making them ideal drug targets, especially for central nervous system …
O Miyashita, F Tama - Current Opinion in Structural Biology, 2023 - Elsevier
Flexible fitting based on molecular dynamics simulation is a technique for structure modeling from cryo-EM data. It has been utilized for nearly two decades, and while cryo-EM resolution …