We propose a novel scalable parallel algorithm for synthesis of interdependent parameters from CTL specifications for non-linear dynamical systems. The method employs a symbolic …
Complex behaviour arising in biological systems is typically characterised by various kinds of attractors. An important problem in this area is to determine these attractors. Biological …
In our previous work, we designed and implemented a synthetic metabolic pathway for 1, 2, 3-trichloropropane (TCP) biodegradation in Escherichia coli. Significant effects of metabolic …
We present a novel tool for parameter synthesis of piecewise multi-affine dynamical systems from specifications expressed in a hybrid branching-time temporal logic. The tool is based …
Parametrised models of dynamical systems arise in various areas of science. In this work, we focus on models described as parametrised Kripke structures with properties formulated …
Formal verification techniques together with other computer science formal methods have been recently tailored for applications to biological and biomedical systems. In contrast to …
Using a probabilistic reachability-based approach, we present a multi-parameter bifurcation analysis of electrical alternans in the two-current Mitchell–Schaeffer (MS) cardiac-cell model …
Signalling pathways provide a complex cellular information processing machinery that evaluates particular input stimuli and transfers them into the genome by means of regulation …
We present a bifurcation analysis of electrical alternans in the two-current Mitchell-Schaeffer (MS) cardiac-cell model using the theory of δ-decidability over the reals. Electrical alternans …