[HTML][HTML] Understanding the cell: Future views of structural biology

M Beck, R Covino, I Hänelt, M Müller-McNicoll - Cell, 2024 - cell.com
Determining the structure and mechanisms of all individual functional modules of cells at
high molecular detail has often been seen as equal to understanding how cells work …

Build and operation of a custom 3D, multicolor, single-molecule localization microscope

RM Power, A Tschanz, T Zimmermann, J Ries - Nature Protocols, 2024 - nature.com
Single-molecule localization microscopy (SMLM) enables imaging scientists to visualize
biological structures with unprecedented resolution. Particularly powerful implementations of …

Maximum-likelihood model fitting for quantitative analysis of SMLM data

YL Wu, P Hoess, A Tschanz, U Matti, M Mund, J Ries - Nature Methods, 2023 - nature.com
Quantitative data analysis is important for any single-molecule localization microscopy
(SMLM) workflow to extract biological insights from the coordinates of the single …

Subtleties in Clathrin heavy chain binding boxes provide selectivity among adaptor proteins of budding yeast

LA Defelipe, K Veith, O Burastero… - Nature …, 2024 - nature.com
Clathrin forms a triskelion, or three-legged, network that regulates cellular processes by
facilitating cargo internalization and trafficking in eukaryotes. Its N-terminal domain is crucial …

Dipping contacts–a novel type of contact site at the interface between membraneless organelles and membranes

C Hoffmann, D Milovanovic - Journal of cell science, 2023 - journals.biologists.com
Liquid–liquid phase separation is a major mechanism for organizing macromolecules,
particularly proteins with intrinsically disordered regions, in compartments not limited by a …

High-speed autopolarization synchronization modulation three-dimensional structured illumination microscopy

Y Li, R Cao, W Ren, Y Fu, Y Hou… - Advanced …, 2024 - spiedigitallibrary.org
In recent years, notable progress has been achieved in both the hardware and algorithms of
structured illumination microscopy (SIM). Nevertheless, the advancement of three …

[HTML][HTML] MicroFPGA: An affordable FPGA platform for microscope control

J Deschamps, C Kieser, P Hoess, T Deguchi, J Ries - HardwareX, 2023 - Elsevier
Modern microscopy relies increasingly on microscope automation to improve throughput,
ensure reproducibility or observe rare events. Automation requires computer control of the …

Clathrin mediates membrane fission and budding by constricting membrane pores

L Wei, X Guo, E Haimov, K Obashi, SH Lee, W Shin… - Cell Discovery, 2024 - nature.com
Membrane budding, which underlies fundamental processes like endocytosis, intracellular
trafficking, and viral infection, is thought to involve membrane coat-forming proteins …

AI analysis of super-resolution microscopy: Biological discovery in the absence of ground truth

IR Nabi, B Cardoen, IM Khater, G Gao, TH Wong… - Journal of Cell …, 2024 - rupress.org
Super-resolution microscopy, or nanoscopy, enables the use of fluorescent-based molecular
localization tools to study molecular structure at the nanoscale level in the intact cell …

Skp1 proteins are structural components of the synaptonemal complex in C. elegans

JM Blundon, BI Cesar, JW Bae, I Čavka, J Haversat… - Science …, 2024 - science.org
The synaptonemal complex (SC) is a zipper-like protein assembly that links homologous
chromosomes to regulate recombination and segregation during meiosis. The SC has been …