Protein production and purification

NOTE: In the version of this Review initially published, an author (B. Martin Hallberg) was left
off of the author list. This information has been added to the HTML and PDF versions of the …

Cre recombinase and other tyrosine recombinases

G Meinke, A Bohm, J Hauber, MT Pisabarro… - Chemical …, 2016 - ACS Publications
Tyrosine-type site-specific recombinases (T-SSRs) have opened new avenues for the
predictable modification of genomes as they enable precise genome editing in heterologous …

DNA cloning using in vitro site-specific recombination

JL Hartley, GF Temple, MA Brasch - Genome research, 2000 - genome.cshlp.org
As a result of numerous genome sequencing projects, large numbers of candidate open
reading frames are being identified, many of which have no known function. Analysis of …

A photoactivatable Cre–loxP recombination system for optogenetic genome engineering

F Kawano, R Okazaki, M Yazawa, M Sato - Nature chemical biology, 2016 - nature.com
Genome engineering techniques represented by the Cre–loxP recombination system have
been used extensively for biomedical research. However, powerful and useful techniques …

A Structural View of Cre-loxP Site-Specific Recombination

GD Van Duyne - Annual review of biophysics and biomolecular …, 2001 - annualreviews.org
▪ Abstract Structural models of site-specific recombinases from the lambda integrase family
of enzymes have in the last four years provided an important new perspective on the three …

Self-excising retroviral vectors encoding the Cre recombinase overcome Cre-mediated cellular toxicity

DP Silver, DM Livingston - Molecular cell, 2001 - cell.com
The Cre-lox system is often used to manipulate sequences in mammalian genomes. We
have observed that continuous expression of the Cre recombinase in cultured cells lacking …

Cre recombinase

GD Van Duyne - Mobile DNA III, 2015 - Wiley Online Library
The use of Cre recombinase to carry out conditional mutagenesis of transgenes and insert
DNA cassettes into eukaryotic chromosomes is widespread (1–9). Indeed, a PubMed search …

DNA conformations and their sequence preferences

D Svozil, J Kalina, M Omelka… - Nucleic Acids …, 2008 - academic.oup.com
The geometry of the phosphodiester backbone was analyzed for 7739 dinucleotides from
447 selected crystal structures of naked and complexed DNA. Ten torsion angles of a near …

Directed evolution of the site specificity of Cre recombinase

SW Santoro, PG Schultz - Proceedings of the National …, 2002 - National Acad Sciences
Cre recombinase from bacteriophage P1 recognizes a 34-bp recombination site, loxP, with
exquisite sequence specificity and catalyzes the site-specific insertion, excision, or …

Geometric analysis and comparison of protein-DNA interfaces: why is there no simple code for recognition?

CO Pabo, L Nekludova - Journal of molecular biology, 2000 - Elsevier
Structural studies of protein-DNA complexes have shown that there are many distinct
families of DNA-binding proteins, and have shown that there is no simple “code” describing …