Stepwise large genome assembly approach: a case of Siberian larch (Larix sibirica Ledeb)

DA Kuzmin, SI Feranchuk, VV Sharov, AN Cybin… - BMC …, 2019 - Springer
Background De novo assembling of large genomes, such as in conifers (~ 12–30 Gbp),
which also consist of~ 80% of repetitive DNA, is a very complex and computationally intense …

Forest management in Mongolia–A review of challenges and lessons learned with special reference to degradation and deforestation

A Gradel, G Sukhbaatar, D Karthe, H Kang - Geography, Environment …, 2019 - ges.rgo.ru
The natural conditions, climate change and socio-economic challenges related to the
transformation from a socialistic society towards a market-driven system make the …

Comparative Genomics Analysis of Repetitive Elements in Ten Gymnosperm Species: “Dark Repeatome” and Its Abundance in Conifer and Gnetum Species

A Titievsky, YA Putintseva, EA Taranenko, S Baskin… - Life, 2021 - mdpi.com
Repetitive elements (RE) and transposons (TE) can comprise up to 80% of some plant
genomes and may be essential for regulating their evolution and adaptation. The …

Development of microsatellite genetic markers in Siberian larch (Larix sibirica Ledeb.) based on the de novo whole genome sequencing

NV Oreshkova, YA Putintseva, VV Sharov… - Russian journal of …, 2017 - Springer
This special issue of the journal is devoted to the outstanding population geneticist Yuri
Petrovich Altukhov, who paid much attention in his research to the development of molecular …

Постгеномные технологии в практическом лесном хозяйстве: разработка полногеномных маркеров для идентификации происхождения древесины и других …

КВ Крутовский, ЮА Путинцева… - Лесотехнический …, 2019 - cyberleninka.ru
The forest genetics, tree improvement and protection can greatly benefit from complete
genome sequence data made recently available for several major conifer species. They …

Symmetry of siberian larch transcriptome

MG Sadovsky, VV Birukov, YA Putintseva… - 2015 - cyberleninka.ru
The paper presents a novel approach to infer a structuredness in a set of symbol sequences
such as transcriptome nucleotide sequences. A distribution pattern of triplet frequencies in …

Conflicting genomic signals affect phylogenetic inference in four species of North American pines

TE Koralewski, M Mateos, KV Krutovsky - Aob Plants, 2016 - academic.oup.com
Adaptive evolutionary processes in plants may be accompanied by episodes of
introgression, parallel evolution and incomplete lineage sorting that pose challenges in …

Revealing the Symmetry of Conifer Transcriptomes through Triplet Statistics

S Michael, P Yulia, B Vladislav, S Maria - Transcriptome Analysis, 2019 - books.google.com
The novel powerful technique is used for a study of combinatorial and statistical properties of
transcriptome sequences. The main approach stands on the study of distribution of …

[PDF][PDF] Intriguing symmetry in statistical structures of Siberian larch transcriptome

MG Sadovsky, VV Birukov, YA Putintseva… - arXiv preprint arXiv …, 2016 - researchgate.net
Key challenge of an up-to-date molecular biology, bioinformatics and mathematics is a
search for an order and structuredness in bulk data provided by modern pipelines …

Предварительные результаты аннотации транскриптома лиственницы сибирской (Larix sibirica Ledeb.) и его кластерный анализ

ВВ Бирюков - Материалы 54-й Международной научной …, 2016 - elibrary.ru
Объект. Объектом данного исследования стал транскриптом лиственицы сибирской
(Larix sibirica Ledeb.), который был впервые секвенирован и собран в Лаборатории …