Ecological modelling approaches for predicting emergent properties in microbial communities

NI van den Berg, D Machado, S Santos… - Nature ecology & …, 2022 - nature.com
Recent studies have brought forward the critical role of emergent properties in shaping
microbial communities and the ecosystems of which they are a part. Emergent properties …

Bacterial siderophores in community and host interactions

J Kramer, Ö Özkaya, R Kümmerli - Nature Reviews Microbiology, 2020 - nature.com
Iron is an essential trace element for most organisms. A common way for bacteria to acquire
this nutrient is through the secretion of siderophores, which are secondary metabolites that …

Spatial structure, cooperation and competition in biofilms

CD Nadell, K Drescher, KR Foster - Nature Reviews Microbiology, 2016 - nature.com
Bacteria often live within matrix-embedded communities, termed biofilms, which are now
understood to be a major mode of microbial life. The study of biofilms has revealed their vast …

Short-range interactions govern the dynamics and functions of microbial communities

A Dal Co, S van Vliet, DJ Kiviet, S Schlegel… - Nature ecology & …, 2020 - nature.com
Communities of interacting microorganisms play important roles across all habitats on Earth.
These communities typically consist of a large number of species that perform different …

Division of labor during biofilm matrix production

A Dragoš, H Kiesewalter, M Martin, CY Hsu… - Current Biology, 2018 - cell.com
Organisms as simple as bacteria can engage in complex collective actions, such as group
motility and fruiting body formation. Some of these actions involve a division of labor, where …

Mechanisms driving spatial distribution of residents in colony biofilms: an interdisciplinary perspective

L Eigentler, FA Davidson… - Open Biology, 2022 - royalsocietypublishing.org
Biofilms are consortia of microorganisms that form collectives through the excretion of
extracellular matrix compounds. The importance of biofilms in biological, industrial and …

Environmentally mediated social dilemmas

S Estrela, E Libby, J Van Cleve, F Débarre… - Trends in ecology & …, 2019 - cell.com
By consuming and producing environmental resources, organisms inevitably change their
habitats. The consequences of such environmental modifications can be detrimental or …

Why microbes secrete molecules to modify their environment: the case of iron-chelating siderophores

GE Leventhal, M Ackermann… - Journal of the Royal …, 2019 - royalsocietypublishing.org
Many microorganisms secrete molecules that interact with resources outside of the cell. This
includes, for example, enzymes that degrade polymers like chitin, and chelators that bind …

Self-establishing communities enable cooperative metabolite exchange in a eukaryote

K Campbell, J Vowinckel, M Mülleder, S Malmsheimer… - Elife, 2015 - elifesciences.org
Metabolite exchange among co-growing cells is frequent by nature, however, is not
necessarily occurring at growth-relevant quantities indicative of non-cell-autonomous …

Habitat structure and the evolution of diffusible siderophores in bacteria

R Kümmerli, KT Schiessl, T Waldvogel… - Ecology …, 2014 - Wiley Online Library
Bacteria typically rely on secreted metabolites, potentially shareable at the community level,
to scavenge resources from the environment. The evolution of diffusible, shareable …