Shifts in the Human Gut Microbiota Structure Caused by Quadruple Helicobacter pylori Eradication Therapy

EI Olekhnovich, AI Manolov, AE Samoilov… - Frontiers in …, 2019 - frontiersin.org
The human gut microbiome plays an important role both in health and disease. Use of
antibiotics can alter gut microbiota composition, which can lead to various deleterious …

MetaCherchant: analyzing genomic context of antibiotic resistance genes in gut microbiota

EI Olekhnovich, AT Vasilyev, VI Ulyantsev… - …, 2018 - academic.oup.com
Motivation Antibiotic resistance is an important global public health problem. Human gut
microbiota is an accumulator of resistance genes potentially providing them to pathogens. It …

Application of molecular techniques in Helicobacter pylori detection: limitations and improvements.

L Gong, EM El‐Omar - Helicobacter, 2021 - search.ebscohost.com
I pylori i strains with certain I vacA iI cagA i genotypes in gastric biopsies. 28 Hence, it would
be important to detect and treat this undetected infection to prevent further transmission …

Complete Genome Sequence of Stenotrophomonas rhizophila KC1, a Quorum Sensing–Producing Algicidal Bacterium Isolated from Mangrove Kandelia candel

Q Zhang, Y Wang, J Zhou - Molecular Plant-Microbe …, 2021 - Am Phytopath Society
This paper describes the isolation of an algicidal strain, Stenotrophomonas rhizophila KC1,
from mangrove (Kandelia candel) and its genome, which was sequenced using next …

Shotgun metagenomic data on the human stool samples to characterize shifts of the gut microbial profile after the Helicobacter pylori eradication therapy

EA Boulygina, MI Markelova, DR Khusnutdinova… - Data in …, 2017 - pmc.ncbi.nlm.nih.gov
The shotgun sequencing data presented in this report are related to the research article
named “Gut microbiome shotgun sequencing in assessment of microbial community …

[HTML][HTML] Draft genomes of Enterococcus faecium strains isolated from human feces before and after eradication therapy against Helicobacter pylori

NA Prianichnikov, MV Malakhova, VV Babenko… - Data in brief, 2018 - Elsevier
The abundance of Enterococci in the human intestinal microbiota environment is usually<
0.1% of the total bacterial fraction. The multiple resistance to antibiotics of the opportunistic …

Bioinformatics analysis of antimicrobial resistance genes and prophages colocalized in human gut metagenomes

EV Starikova, NA Prianichnikov, E Zdobnov… - … ), Supplement Series B …, 2018 - Springer
The constant increase of bacterial antibiotic-resistant strains is directly linked to a common
use of antibiotics in medicine and animal breeding. It is suggested that the gut microbiota …

Bioinformatics analysis of antimicrobial resistance genes and prophages colocalized in human gut metagenomes

EV Starikova, NA Prianichnikov… - Biomeditsinskaya …, 2017 - pbmc.ibmc.msk.ru
The constant increase of antibiotic-resistant strains of bacteria is caused by extensive uses
of antibiotics in medicine and animal breeding. It was suggested that the gut microbiota …

MetaCherchant-an algorithm for analyzing genomic environment of antibiotic resistance gene in gut microbiota

EI Olekhnovich, AT Vasilyev, VI Ulyantsev, AV Tyakht - bioRxiv, 2017 - biorxiv.org
Antibiotic resistance is an important global public health problem. Human gut human
microbiota is an accumulator of resistance genes potentially providing them to pathogens. It …

[HTML][HTML] The data of genomic and phenotypic profiles of the N-acyl homoserine lactone-producing algicidal bacterium Stenotrophomonas rhizophila GA1

P Yin, Q Zhang, J Zhu, G Wu, S Yin, Z Ma, J Zhou - Data in brief, 2018 - Elsevier
Herein, an algicidal strain, Stenotrophomonas rhizophila GA1, was isolated from a marine
dinoflagellate and its genome was sequenced using next-generation sequencing …