Proximity‐dependent labeling methods for proteomic profiling in living cells: An update

JA Bosch, CL Chen, N Perrimon - Wiley Interdisciplinary …, 2021 - Wiley Online Library
Characterizing the proteome composition of organelles and subcellular regions of living
cells can facilitate the understanding of cellular organization as well as protein interactome …

Loss-of-function genetic tools for animal models: cross-species and cross-platform differences

BE Housden, M Muhar, M Gemberling… - Nature Reviews …, 2017 - nature.com
Our understanding of the genetic mechanisms that underlie biological processes has relied
extensively on loss-of-function (LOF) analyses. LOF methods target DNA, RNA or protein to …

The glia-neuron lactate shuttle and elevated ROS promote lipid synthesis in neurons and lipid droplet accumulation in glia via APOE/D

L Liu, KR MacKenzie, N Putluri, M Maletić-Savatić… - Cell metabolism, 2017 - cell.com
Elevated reactive oxygen species (ROS) induce the formation of lipids in neurons that are
transferred to glia, where they form lipid droplets (LDs). We show that glial and neuronal …

FlyBase at 25: looking to the future

LS Gramates, SJ Marygold, G Santos… - Nucleic acids …, 2016 - academic.oup.com
Abstract Since 1992, FlyBase (flybase. org) has been an essential online resource for the
Drosophila research community. Concentrating on the most extensively studied species …

A gene-specific T2A-GAL4 library for Drosophila

PT Lee, J Zirin, O Kanca, WW Lin, KL Schulze… - elife, 2018 - elifesciences.org
We generated a library of~ 1000 Drosophila stocks in which we inserted a construct in the
intron of genes allowing expression of GAL4 under control of endogenous promoters while …

A genetic, genomic, and computational resource for exploring neural circuit function

FP Davis, A Nern, S Picard, MB Reiser, GM Rubin… - Elife, 2020 - elifesciences.org
The anatomy of many neural circuits is being characterized with increasing resolution, but
their molecular properties remain mostly unknown. Here, we characterize gene expression …

[HTML][HTML] A gut-secreted peptide suppresses arousability from sleep

I Titos, A Juginović, A Vaccaro, K Nambara, P Gorelik… - Cell, 2023 - cell.com
Suppressing sensory arousal is critical for sleep, with deeper sleep requiring stronger
sensory suppression. The mechanisms that enable sleeping animals to largely ignore their …

A genome-wide resource for the analysis of protein localisation in Drosophila

M Sarov, C Barz, H Jambor, MY Hein, C Schmied… - elife, 2016 - elifesciences.org
The Drosophila genome contains> 13000 protein-coding genes, the majority of which
remain poorly investigated. Important reasons include the lack of antibodies or reporter …

Plug-and-play genetic access to drosophila cell types using exchangeable exon cassettes

F Diao, H Ironfield, H Luan, F Diao, WC Shropshire… - Cell reports, 2015 - cell.com
Genetically encoded effectors are important tools for probing cellular function in living
animals, but improved methods for directing their expression to specific cell types are …

Interactive nanocluster compaction of the ELKS scaffold and Cacophony Ca2+ channels drives sustained active zone potentiation

T Ghelani, M Escher, U Thomas, K Esch… - Science …, 2023 - science.org
At presynaptic active zones (AZs), conserved scaffold protein architectures control synaptic
vesicle (SV) release by defining the nanoscale distribution and density of voltage-gated …