Predicting epitopes for vaccine development using bioinformatics tools

V Yurina, OR Adianingsih - Therapeutic advances in …, 2022 - journals.sagepub.com
Epitope-based DNA vaccine development is one application of bioinformatics or in silico
studies, that is, computational methods, including mathematical, chemical, and biological …

Multi-strain human papillomavirus (HPV) vaccine innovation via computational study: A mini review

VD Kharisma, ANM Ansori, V Jakhmola… - Research Journal of …, 2022 - indianjournals.com
Human papillomavirus (HPV) is a small and non-enveloped deoxyribonucleic acid (DNA)
virus that infected mucosal cells. This viral genome is composed of early and late genes …

In silico Study of Natural inhibitors for Human papillomavirus-18 E6 protein

A Proboningrat, VD Kharisma… - Research Journal of …, 2022 - indianjournals.com
Globally, the leading cause of death from cancer in women is infection with the human
papillomavirus (HPV). This calls for imperative actions to explore anticancer drugs against …

[PDF][PDF] Construction of epitope-based peptide vaccine against SARS-CoV-2: Immunoinformatics study

VD Kharisma, ANM Ansori - J Pure Appl Microbiol, 2020 - researchgate.net
Recently, a novel coronavirus (SARS-CoV-2) appeared which is conscientious for the
current outbreak in China and rapidly spread worldwide. Unluckily, there is no approved …

DNA Vaccines: Their formulations, engineering and delivery

M Kozak, J Hu - Vaccines, 2024 - mdpi.com
The concept of DNA vaccination was introduced in the early 1990s. Since then,
advancements in the augmentation of the immunogenicity of DNA vaccines have brought …

[PDF][PDF] Computational study of ginger (Zingiber officinale) as E6 inhibitor in human papillomavirus type 16 (HPV-16) infection

VD Kharisma, ANM Ansori, AP Nugraha - Biochem Cell Arch, 2020 - researchgate.net
Cervical cancer caused by a high-risk type of HPV-16 infection, causing death for a woman
due to not being treated early. However, some problems such as the high cost of …

[PDF][PDF] Molecular simulation: the potency of conserved region on E6 HPV-16 as a binding target of black tea compounds against cervical cancer.

VD Kharisma, AN Muhammad Ansori… - … & Cellular Archives, 2020 - researchgate.net
Cervical cancer ranks fourth as the deadliest cancer in women in this part of the world,
around 0.5 million women and close to 0.25 million people infected with cervical cancer …

[PDF][PDF] In silico ADME-T and molecular docking study of phytoconstituents from Tithonia diversifolia (Hemsl.) A. Gray on various targets of diabetic nephropathy

OR Adianingsih, U Khasanah, KD Anandhy… - J Pharm Pharmacogn …, 2022 - academia.edu
Abstract Context: Tithonia diversifolia (Hemsl.) A. Gray has been known for treatment of
diabetes mellitus, yet its mechanism as anti-diabetic has not been defined. There are …

Immunoinformatics and MD-simulation data suggest that Omicron spike epitopes are more interacting to IgG via better MHC recognition than Delta variant

A Sarkar, D Santra, AS Panja, S Maiti - International Immunopharmacology, 2023 - Elsevier
Abstract Background Recently, in Nov 2021, in South Africa, the SARS CoV-2 variant
Omicron was found to be highly infectious and transmissible but with the least fatality. It …

[PDF][PDF] Viroinformatics investigation of B-cell epitope conserved region in SARS-CoV-2 lineage B. 1.1. 7 isolates originated from Indonesia to develop vaccine …

ANM Ansori, RV Nidom, MKJ Kusala… - J Pharm …, 2021 - researchgate.net
Abstract Resumen Context: SARS-CoV-2, a member of family Coronaviridae and the
causative agent of COVID-19, is a virus which is transmitted to human and other mammals …