The cancer spliceome: reprograming of alternative splicing in cancer

E El Marabti, I Younis - Frontiers in molecular biosciences, 2018 - frontiersin.org
Alternative splicing allows for the expression of multiple RNA and protein isoforms from one
gene, making it a major contributor to transcriptome and proteome diversification in …

The functional impact of alternative splicing in cancer

H Climente-González, E Porta-Pardo, A Godzik… - Cell reports, 2017 - cell.com
Alternative splicing changes are frequently observed in cancer and are starting to be
recognized as important signatures for tumor progression and therapy. However, their …

Alternative splicing of mRNA in colorectal cancer: new strategies for tumor diagnosis and treatment

Y Chen, M Huang, X Liu, Y Huang, C Liu, J Zhu… - Cell Death & …, 2021 - nature.com
Alternative splicing (AS) is an important event that contributes to posttranscriptional gene
regulation. This process leads to several mature transcript variants with diverse …

SRSF1-regulated alternative splicing in breast cancer

O Anczuków, M Akerman, A Cléry, J Wu, C Shen… - Molecular cell, 2015 - cell.com
Splicing factor SRSF1 is upregulated in human breast tumors, and its overexpression
promotes transformation of mammary cells. Using RNA-seq, we identified SRSF1-regulated …

Characterising the RNA-binding protein atlas of the mammalian brain uncovers RBM5 misregulation in mouse models of Huntington's disease

M Mullari, N Fossat, NH Skotte… - Nature …, 2023 - nature.com
RNA-binding proteins (RBPs) are key players regulating RNA processing and are
associated with disorders ranging from cancer to neurodegeneration. Here, we present a …

Specific inhibition of splicing factor activity by decoy RNA oligonucleotides

P Denichenko, M Mogilevsky, A Cléry, T Welte… - Nature …, 2019 - nature.com
Alternative splicing, a fundamental step in gene expression, is deregulated in many
diseases. Splicing factors (SFs), which regulate this process, are up-or down regulated or …

Exon‐independent recruitment of SRSF1 is mediated by U1 snRNP stem‐loop 3

AM Jobbins, S Campagne, R Weinmeister… - The EMBO …, 2022 - embopress.org
SRSF1 protein and U1 snRNPs are closely connected splicing factors. They both stimulate
exon inclusion, SRSF1 by binding to exonic splicing enhancer sequences (ESEs) and U1 …

Mechanism of nonsense-mediated mRNA decay stimulation by splicing factor SRSF1

I Aznarez, TT Nomakuchi, J Tetenbaum-Novatt… - Cell reports, 2018 - cell.com
The splicing factor SRSF1 promotes nonsense-mediated mRNA decay (NMD), a quality
control mechanism that degrades mRNAs with premature termination codons (PTCs). Here …

[HTML][HTML] Functional analyses of human LUC7-like proteins involved in splicing regulation and myeloid neoplasms

NJ Daniels, CE Hershberger, X Gu, C Schueger… - Cell reports, 2021 - cell.com
Vertebrates have evolved three paralogs, termed LUC7L, LUC7L2, and LUC7L3, of the
essential yeast U1 small nuclear RNA (snRNA)-associated splicing factor Luc7p. We …

R-DeeP: proteome-wide and quantitative identification of RNA-dependent proteins by density gradient ultracentrifugation

M Caudron-Herger, SF Rusin, ME Adamo, J Seiler… - Molecular cell, 2019 - cell.com
The comprehensive but specific identification of RNA-binding proteins as well as the
discovery of RNA-associated protein functions remain major challenges in RNA biology …