Rice blast management through host-plant resistance: retrospect and prospects
Rice (Oryza sativa) plays a significant role in achieving global food security. However, it
suffers from several biotic and abiotic stresses that seriously affect its production. Rice blast …
suffers from several biotic and abiotic stresses that seriously affect its production. Rice blast …
Plant pangenomics: approaches, applications and advancements
Highlights•Pan-genomes represent the complex genomic diversity found in plant
species.•Novel approaches are under development to enable more complex pan-genome …
species.•Novel approaches are under development to enable more complex pan-genome …
Two gap-free reference genomes and a global view of the centromere architecture in rice
Rice (Oryza sativa), a major staple throughout the world and a model system for plant
genomics and breeding, was the first crop genome sequenced almost two decades ago …
genomics and breeding, was the first crop genome sequenced almost two decades ago …
Genomic insights into the recent chromosome reduction of autopolyploid sugarcane Saccharum spontaneum
Saccharum spontaneum is a founding Saccharum species and exhibits wide variation in
ploidy levels. We have assembled a high-quality autopolyploid genome of S. spontaneum …
ploidy levels. We have assembled a high-quality autopolyploid genome of S. spontaneum …
The genome of woodland strawberry (Fragaria vesca)
The woodland strawberry, Fragaria vesca (2 n= 2 x= 14), is a versatile experimental plant
system. This diminutive herbaceous perennial has a small genome (240 Mb), is amenable to …
system. This diminutive herbaceous perennial has a small genome (240 Mb), is amenable to …
The Sorghum bicolor genome and the diversification of grasses
Sorghum, an African grass related to sugar cane and maize, is grown for food, feed, fibre
and fuel. We present an initial analysis of the∼ 730-megabase Sorghum bicolor (L.) …
and fuel. We present an initial analysis of the∼ 730-megabase Sorghum bicolor (L.) …
The TIGR rice genome annotation resource: improvements and new features
Abstract In The Institute for Genomic Research Rice Genome Annotation project (), we have
continued to update the rice genome sequence with new data and improve the quality of the …
continued to update the rice genome sequence with new data and improve the quality of the …
Recent duplications dominate NBS-encoding gene expansion in two woody species
Most disease resistance genes in plants encode NBS-LRR proteins. However, in woody
species, little is known about the evolutionary history of these genes. Here, we identified 459 …
species, little is known about the evolutionary history of these genes. Here, we identified 459 …
Current status and the future of fluorescence in situ hybridization (FISH) in plant genome research
Fluorescence in situ hybridization (FISH), which allows direct mapping of DNA sequences
on chromosomes, has become the most important technique in plant molecular cytogenetics …
on chromosomes, has become the most important technique in plant molecular cytogenetics …
Characterization of disease resistance genes in the Brassica napus pangenome reveals significant structural variation
Methods based on single nucleotide polymorphism (SNP), copy number variation (CNV)
and presence/absence variation (PAV) discovery provide a valuable resource to study gene …
and presence/absence variation (PAV) discovery provide a valuable resource to study gene …