Fluorescent nucleobases as tools for studying DNA and RNA

W Xu, KM Chan, ET Kool - Nature chemistry, 2017 - nature.com
Understanding the diversity of dynamic structures and functions of DNA and RNA in biology
requires tools that can selectively and intimately probe these biomolecules. Synthetic …

Fluorescent analogs of biomolecular building blocks: design, properties, and applications

RW Sinkeldam, NJ Greco, Y Tor - Chemical reviews, 2010 - ACS Publications
Fluorescence spectroscopy, one of the most informative and sensitive analytical techniques,
has played and continues to play key roles in modern research. Indeed, unraveling the inner …

Suppression of Kasha's rule as a mechanism for fluorescent molecular rotors and aggregation-induced emission

H Qian, ME Cousins, EH Horak, A Wakefield… - Nature …, 2017 - nature.com
Although there are some proposed explanations for aggregation-induced emission, a
phenomenon with applications that range from biosensors to organic light-emitting diodes …

Fluorescent nucleic acid base analogues

LM Wilhelmsson - Quarterly reviews of biophysics, 2010 - cambridge.org
The use of fluorescent nucleic acid base analogues is becoming increasingly important in
the fields of biology, biochemistry and biophysical chemistry as well as in the field of DNA …

Probing of nucleic acid structures, dynamics, and interactions with environment-sensitive fluorescent labels

BY Michel, D Dziuba, R Benhida… - Frontiers in …, 2020 - frontiersin.org
Fluorescence labeling and probing are fundamental techniques for nucleic acid analysis
and quantification. However, new fluorescent probes and approaches are urgently needed …

Emissive RNA alphabet

D Shin, RW Sinkeldam, Y Tor - Journal of the American Chemical …, 2011 - ACS Publications
A fluorescent ribonucleoside alphabet consisting of highly emissive purine (th A, th G) and
pyrimidine (th U, th C) analogues, all derived from thieno [3, 4-d] pyrimidine as the …

Fluorescent nucleoside analogs: probes for investigating nucleic acid structure and function

AA Tanpure, MG Pawar… - Israel Journal of …, 2013 - Wiley Online Library
Base‐modified fluorescent nucleoside analog probes have been very valuable in the study
of nucleic acid structure and function. Many of them structurally resemble natural bases, and …

Isomorphic Fluorescent Nucleosides

Y Tor - Accounts of Chemical Research, 2024 - ACS Publications
Conspectus In 1960, Weber prophesied that “There are many ways in which the properties
of the excited state can be utilized to study points of ignorance of the structure and function …

Postsynthetic guanine arylation of DNA by Suzuki− Miyaura cross-coupling

A Omumi, DG Beach, M Baker… - Journal of the …, 2011 - ACS Publications
Direct radical addition reactions at the C 8-site of 2′-deoxyguanosine (dG) can afford C 8-
Ar-dG adducts that are produced by carcinogenic arylhydrazines, polycyclic aromatic …

Fluorescent Probe for Proton-Coupled DNA Folding Revealing Slow Exchange of i-Motif and Duplex Structures

G Mata, NW Luedtke - Journal of the American Chemical Society, 2015 - ACS Publications
Ionized nucleobases participate in pairing interactions outside of Watson and Crick's rules.
Base pairing and ionization can be coupled via global conformational changes to raise the …