Comparative assessment of genes driving cancer and somatic evolution in non-cancer tissues: an update of the Network of Cancer Genes (NCG) resource

L Dressler, M Bortolomeazzi, MR Keddar, H Misetic… - Genome biology, 2022 - Springer
Background Genetic alterations of somatic cells can drive non-malignant clone formation
and promote cancer initiation. However, the link between these processes remains unclear …

The many faces of gene regulation in cancer: a computational oncogenomics outlook

E Hernández-Lemus, H Reyes-Gopar… - Genes, 2019 - mdpi.com
Cancer is a complex disease at many different levels. The molecular phenomenology of
cancer is also quite rich. The mutational and genomic origins of cancer and their …

Comprehensive characterisation of intronic mis-splicing mutations in human cancers

H Jung, KS Lee, JK Choi - Oncogene, 2021 - nature.com
Previous studies studying mis-splicing mutations were based on exome data and thus our
current knowledge is largely limited to exons and the canonical splice sites. To …

Mutations associated with progression in follicular lymphoma predict inferior outcomes at diagnosis: Alliance A151303

DA Russler-Germain, K Krysiak, C Ramirez… - Blood …, 2023 - ashpublications.org
Follicular lymphoma (FL) is clinically heterogeneous, with select patients tolerating extended
watch-and-wait, whereas others require prompt treatment, suffer progression of disease …

Discovery of novel predisposing coding and noncoding variants in familial Hodgkin lymphoma

JE Flerlage, JR Myers, JL Maciaszek, N Oak… - Blood, 2023 - ashpublications.org
Familial aggregation of Hodgkin lymphoma (HL) has been demonstrated in large population
studies, pointing to genetic predisposition to this hematological malignancy. To understand …

A comprehensive analysis of RHOA mutation positive and negative angioimmunoblastic T-cell lymphomas by targeted deep sequencing, expression profiling and …

A Butzmann, K Sridhar, D Jangam… - International …, 2020 - spandidos-publications.com
Angioimmunoblastic T‑cell lymphoma (AITL) is a uniquely aggressive mature T‑cell
neoplasm. In recent years, recurrent genetic mutations in ras homolog family member A …

The role of noncoding mutations in blood cancers

S Rahman, MR Mansour - Disease Models & Mechanisms, 2019 - journals.biologists.com
The search for oncogenic mutations in haematological malignancies has largely focused on
coding sequence variants. These variants have been critical in understanding these …

Pan-cancer analysis of non-coding recurrent mutations and their possible involvement in cancer pathogenesis

C Kikutake, M Yoshihara, M Suyama - NAR cancer, 2021 - academic.oup.com
Cancer-related mutations have been mainly identified in protein-coding regions. Recent
studies have demonstrated that mutations in non-coding regions of the genome could also …

Landscape of copy number aberrations in esophageal squamous cell carcinoma from a high endemic region of South Africa

J Brown, AJ Stepien, P Willem - BMC cancer, 2020 - Springer
Background Esophageal squamous cell carcinoma (ESCC) is an aggressive cancer with
one of the highest world incidences in the Eastern Cape region of South Africa. Several …

Spatial genome architecture and the emergence of malignancy

A Danieli, A Papantonis - Human Molecular Genetics, 2020 - academic.oup.com
Human chromosomes are large spatially and hierarchically structured entities, the integrity
of which needs to be preserved throughout the lifespan of the cell and in conjunction with …