Building, composing and experimenting complex spatial models with the GAMA platform

P Taillandier, B Gaudou, A Grignard, QN Huynh… - GeoInformatica, 2019 - Springer
The agent-based modeling approach is now used in many domains such as geography,
ecology, or economy, and more generally to study (spatially explicit) socio-environmental …

[HTML][HTML] Systems biology at the giga-scale: Large multiscale models of complex, heterogeneous multicellular systems

A Montagud, M Ponce-de-Leon, A Valencia - Current Opinion in Systems …, 2021 - Elsevier
Agent-based modelling has proven its usefulness in several biomedical projects by
explaining and uncovering mechanisms in diseases. Nevertheless, the scenarios addressed …

Dynamic steering of HPC scientific workflows: A survey

M Mattoso, J Dias, KACS Ocana, E Ogasawara… - Future Generation …, 2015 - Elsevier
The field of scientific workflow management systems has grown significantly as applications
start using them successfully. In 2007, several active researchers in scientific workflow …

[HTML][HTML] A workflow to process 3D+ time microscopy images of developing organisms and reconstruct their cell lineage

E Faure, T Savy, B Rizzi, C Melani, O Stašová… - Nature …, 2016 - nature.com
The quantitative and systematic analysis of embryonic cell dynamics from in vivo 3D+ time
image data sets is a major challenge at the forefront of developmental biology. Despite …

[HTML][HTML] Towards reusable building blocks for agent-based modelling and theory development

U Berger, A Bell, CM Barton, E Chappin… - … Modelling & Software, 2024 - Elsevier
Despite the increasing use of standards for documenting and testing agent-based models
(ABMs) and sharing of open access code, most ABMs are still developed from scratch. This …

Customizable process design for collaborative geographic analysis

Z Ma, M Chen, Z Zheng, S Yue, Z Zhu… - GIScience & Remote …, 2022 - Taylor & Francis
Collaborative geographic analysis can lead to better outcomes but requires complicated
interactions among participants, support resources and analytic tools. A process expression …

[HTML][HTML] A spatial agent based model for simulating and optimizing networked eco-industrial systems

J Raimbault, J Broere, M Somveille, JM Serna… - Resources …, 2020 - Elsevier
Industrial symbiosis involves creating integrated cycles of by-products and waste between
networks of industrial actors in order to maximize economic value, while at the same time …

Coupling plant growth models and pest and disease models: An interaction structure proposal, MIMIC

HEM Triki, F Ribeyre, F Pinard, M Jaeger - Plant Phenomics, 2023 - spj.science.org
Coupling plant growth model with pests and diseases (P&D) models, with consideration for
the long-term feedback that occurs after the interaction, is still a challenging task nowadays …

Systemic Sustainable HCI: Integrating Collaborative Modeling into a Design Process to Address Rebound Effects

L Bornes, C Letondal, R Vingerhoeds - Proceedings of the 2024 ACM …, 2024 - dl.acm.org
The introduction of a new product or service into society can have detrimental effects on the
environment due to changes in usage and practices. Human-Computer Interaction (HCI) …

Qualities, challenges and future of genetic algorithms: a literature review

A Vie, AM Kleinnijenhuis, DJ Farmer - arXiv preprint arXiv:2011.05277, 2020 - arxiv.org
Genetic algorithms, computer programs that simulate natural evolution, are increasingly
applied across many disciplines. They have been used to solve various optimisation …