Functional 5′ UTR mRNA structures in eukaryotic translation regulation and how to find them

K Leppek, R Das, M Barna - Nature reviews Molecular cell biology, 2018 - nature.com
RNA molecules can fold into intricate shapes that can provide an additional layer of control
of gene expression beyond that of their sequence. In this Review, we discuss the current …

Protein synthesis initiation in eukaryotic cells

WC Merrick, GD Pavitt - Cold Spring Harbor perspectives …, 2018 - cshperspectives.cshlp.org
This review summarizes our current understanding of the major pathway for the initiation
phase of protein synthesis in eukaryotic cells, with a focus on recent advances. We describe …

The dynamic N1-methyladenosine methylome in eukaryotic messenger RNA

D Dominissini, S Nachtergaele, S Moshitch-Moshkovitz… - Nature, 2016 - nature.com
Gene expression can be regulated post-transcriptionally through dynamic and reversible
RNA modifications. A recent noteworthy example is N 6-methyladenosine (m6A), which …

The organizing principles of eukaryotic ribosome recruitment

J Pelletier, N Sonenberg - Annual review of biochemistry, 2019 - annualreviews.org
The stage at which ribosomes are recruited to messenger RNAs (mRNAs) is an elaborate
and highly regulated phase of protein synthesis. Upon completion of this step, a ribosome is …

Signaling pathways involved in the regulation of mRNA translation

PP Roux, I Topisirovic - Molecular and cellular biology, 2018 - Am Soc Microbiol
Translation is a key step in the regulation of gene expression and one of the most energy-
consuming processes in the cell. In response to various stimuli, multiple signaling pathways …

Translation inhibition and stress granules in the antiviral immune response

C McCormick, DA Khaperskyy - Nature Reviews Immunology, 2017 - nature.com
Efficient viral gene expression is threatened by cellular stress response programmes that
rapidly reprioritize the translation machinery in response to varied environmental assaults …

The scanning mechanism of eukaryotic translation initiation

AG Hinnebusch - Annual review of biochemistry, 2014 - annualreviews.org
In eukaryotes, the translation initiation codon is generally identified by the scanning
mechanism, wherein every triplet in the messenger RNA leader is inspected for …

New frontiers in translational control of the cancer genome

ML Truitt, D Ruggero - Nature Reviews Cancer, 2016 - nature.com
The past several years have seen dramatic leaps in our understanding of how gene
expression is rewired at the translation level during tumorigenesis to support the …

Regulation of gene expression in trypanosomatids: living with polycistronic transcription

C Clayton - Open biology, 2019 - royalsocietypublishing.org
In trypanosomes, RNA polymerase II transcription is polycistronic and individual mRNAs are
excised by trans-splicing and polyadenylation. The lack of individual gene transcription …

From unwinding to clamping—the DEAD box RNA helicase family

P Linder, E Jankowsky - Nature reviews Molecular cell biology, 2011 - nature.com
RNA helicases of the DEAD box family are present in all eukaryotic cells and in many
bacteria and Archaea. These highly conserved enzymes are required for RNA metabolism …