Antigen presentation in cancer—mechanisms and clinical implications for immunotherapy

K Yang, A Halima, TA Chan - Nature Reviews Clinical Oncology, 2023 - nature.com
Over the past decade, the emergence of effective immunotherapies has revolutionized the
clinical management of many types of cancers. However, long-term durable tumour control …

Present yourself! By MHC class I and MHC class II molecules

KL Rock, E Reits, J Neefjes - Trends in immunology, 2016 - cell.com
Since the discovery of MHC molecules, it has taken 40 years to arrive at a coherent picture
of how MHC class I and MHC class II molecules really work. This is a story of the proteases …

Systematic discovery of neoepitope–HLA pairs for neoantigens shared among patients and tumor types

HR Gurung, AJ Heidersbach, M Darwish… - Nature …, 2024 - nature.com
The broad application of precision cancer immunotherapies is limited by the number of
validated neoepitopes that are common among patients or tumor types. To expand the …

Systematically benchmarking peptide-MHC binding predictors: From synthetic to naturally processed epitopes

W Zhao, X Sher - PLoS computational biology, 2018 - journals.plos.org
A number of machine learning-based predictors have been developed for identifying
immunogenic T-cell epitopes based on major histocompatibility complex (MHC) class I and II …

The SPPL3-defined glycosphingolipid repertoire orchestrates HLA class I-mediated immune responses

MLM Jongsma, AA de Waard, M Raaben, T Zhang… - Immunity, 2021 - cell.com
Summary HLA class I (HLA-I) glycoproteins drive immune responses by presenting antigens
to cognate CD8+ T cells. This process is often hijacked by tumors and pathogens for …

Influence of protein fold stability on immunogenicity and its implications for vaccine design

S Scheiblhofer, J Laimer, Y Machado… - Expert review of …, 2017 - Taylor & Francis
Introduction: In modern vaccinology and immunotherapy, recombinant proteins more and
more replace whole organisms to induce protective or curative immune responses …

ERAP1-ERAP2 dimers trim MHC I-bound precursor peptides; implications for understanding peptide editing

H Chen, L Li, M Weimershaus, I Evnouchidou… - Scientific reports, 2016 - nature.com
The processing of MHC class I antigenic precursor peptides by the endoplasmic reticulum
aminopeptidase 1 (ERAP1) and ERAP2 is an important event in the cell biology of antigen …

Hit-and-run vaccine system that overcomes limited neoantigen epitopes for efficient broad antitumor response

H Chen, Z Huang, J Li, S Dong, Y Xu, S Ma, J Zhao… - Science Bulletin, 2024 - Elsevier
Neoantigen cancer vaccines have been envisioned as one of the most promising means for
cancer therapies. However, identifying neoantigens for tumor types with low tumor mutation …

PANDORA: a fast, anchor-restrained modelling protocol for peptide: MHC complexes

DF Marzella, FM Parizi, D Tilborg, N Renaud… - Frontiers in …, 2022 - frontiersin.org
Deeper understanding of T-cell-mediated adaptive immune responses is important for the
design of cancer immunotherapies and antiviral vaccines against pandemic outbreaks. T …

[HTML][HTML] Playing hide and seek: Tumor cells in control of MHC class I antigen presentation

MLM Jongsma, J Neefjes, RM Spaapen - Molecular Immunology, 2021 - Elsevier
Abstract MHC class I (MHC-I) molecules present a blueprint of the intracellular proteome to T
cells allowing them to control infection or malignant transformation. As a response …