[HTML][HTML] DNA barcode reference libraries for the monitoring of aquatic biota in Europe: Gap-analysis and recommendations for future work

H Weigand, AJ Beermann, F Čiampor, FO Costa… - Science of the Total …, 2019 - Elsevier
Effective identification of species using short DNA fragments (DNA barcoding and DNA
metabarcoding) requires reliable sequence reference libraries of known taxa. Both …

[HTML][HTML] The future of biotic indices in the ecogenomic era: Integrating (e) DNA metabarcoding in biological assessment of aquatic ecosystems

J Pawlowski, M Kelly-Quinn, F Altermatt… - Science of the Total …, 2018 - Elsevier
The bioassessment of aquatic ecosystems is currently based on various biotic indices that
use the occurrence and/or abundance of selected taxonomic groups to define ecological …

Implementation options for DNA-based identification into ecological status assessment under the European Water Framework Directive

D Hering, A Borja, JI Jones, D Pont, P Boets… - Water research, 2018 - Elsevier
Assessment of ecological status for the European Water Framework Directive (WFD) is
based on “Biological Quality Elements”(BQEs), namely phytoplankton, benthic flora, benthic …

Three hundred ways to assess Europe's surface waters: an almost complete overview of biological methods to implement the Water Framework Directive

S Birk, W Bonne, A Borja, S Brucet, A Courrat… - Ecological …, 2012 - Elsevier
According to the Water Framework Directive (WFD), the status of European surface waters is
assessed using aquatic organism groups. Here we present an overview of 297 assessment …

Stream biomonitoring using macroinvertebrates around the globe: a comparison of large-scale programs

DF Buss, DM Carlisle, TS Chon, J Culp… - Environmental …, 2015 - Springer
Water quality agencies and scientists are increasingly adopting standardized sampling
methodologies because of the challenges associated with interpreting data derived from …

Functional traits as indicators of biodiversity response to land use changes across ecosystems and organisms

M Vandewalle, F De Bello, MP Berg, T Bolger… - Biodiversity and …, 2010 - Springer
Rigorous and widely applicable indicators of biodiversity are needed to monitor the
responses of ecosystems to global change and design effective conservation schemes …

Biomonitoring and bioindicators used for river ecosystems: definitions, approaches and trends

L Li, B Zheng, L Liu - Procedia environmental sciences, 2010 - Elsevier
In this paper, we present a review on concepts, current use and anticipated future directions
of biomonitoring approaches and bioindicators used for river ecosystems. Periphyton …

Biomonitoring of human impacts in freshwater ecosystems: the good, the bad and the ugly

N Friberg, N Bonada, DC Bradley, MJ Dunbar… - Advances in ecological …, 2011 - Elsevier
It is critical that the impacts of environmental stressors on natural systems are detected,
monitored and assessed accurately in order to legislate effectively and to protect and restore …

A process for creating multimetric indices for large-scale aquatic surveys

JL Stoddard, AT Herlihy, DV Peck… - Journal of the North …, 2008 - journals.uchicago.edu
Differences in sampling and laboratory protocols, differences in techniques used to evaluate
metrics, and differing scales of calibration and application prohibit the use of many existing …

Global trends and challenges in multimetric indices of biological condition

R Ruaro, EA Gubiani, RM Hughes, RP Mormul - Ecological Indicators, 2020 - Elsevier
The use of multimetric indices (MMIs) of biological condition has been globally applied
because they are practical tools that incorporate various biological metrics at different levels …