Revisiting criteria for plant microRNA annotation in the era of big data

MJ Axtell, BC Meyers - The Plant Cell, 2018 - academic.oup.com
Abstract MicroRNAs (miRNAs) are∼ 21-nucleotide-long regulatory RNAs that arise from
endonucleolytic processing of hairpin precursors. Many function as essential …

Classification and comparison of small RNAs from plants

MJ Axtell - Annual review of plant biology, 2013 - annualreviews.org
Regulatory small RNAs, which range in size from 20 to 24 nucleotides, are ubiquitous
components of endogenous plant transcriptomes, as well as common responses to …

MicroRNA miR396, GRF transcription factors and GIF co-regulators: a conserved plant growth regulatory module with potential for breeding and biotechnology

D Liebsch, JF Palatnik - Current opinion in plant biology, 2020 - Elsevier
Highlights•The miR396–GRF/GIF network regulates plant growth and development in
angiosperms.•GRFs and GIFs promote growth via cell proliferation and/or expansion.• …

The functions of plant small RNA s in development and in stress responses

S Li, C Castillo‐González, B Yu, X Zhang - The Plant Journal, 2017 - Wiley Online Library
Like metazoans, plants use small regulatory RNA s (sRNA s) to direct gene expression.
Several classes of sRNA s, which are distinguished by their origin and biogenesis, exist in …

miR396 affects mycorrhization and root meristem activity in the legume Medicago truncatula

J Bazin, GA Khan, JP Combier… - The Plant …, 2013 - Wiley Online Library
The root system is crucial for acquisition of resources from the soil. In legumes, the efficiency
of mineral and water uptake by the roots may be reinforced due to establishment of …

[HTML][HTML] A new gain-of-function OsGS2/GRF4 allele generated by CRISPR/Cas9 genome editing increases rice grain size and yield

W Wang, W Wang, Y Pan, C Tan, H Li, Y Chen, X Liu… - The Crop Journal, 2022 - Elsevier
Grain size is one of the most important factors affecting rice grain quality and yield, and
attracts great attention from molecular biologists and breeders. In this study, we engineered …

Genome-wide identification of alternate bearing-associated microRNAs (miRNAs) in olive (Olea europaeaL.)

H Yanik, M Turktas, E Dundar, P Hernandez… - BMC plant biology, 2013 - Springer
Background Alternate bearing is a widespread phenomenon among crop plants, defined as
the tendency of certain fruit trees to produce a high-yield crop one year (" on-year"), followed …

A Comprehensive Genome-Wide Study on Tissue-Specific and Abiotic Stress-Specific miRNAs in Triticum aestivum

R Pandey, G Joshi, AR Bhardwaj, M Agarwal… - PloS one, 2014 - journals.plos.org
Productivity of wheat crop is largely dependent on its growth and development that, in turn,
is mainly regulated by environmental conditions, including abiotic stress factors. miRNAs are …

Rice microRNA171f/SCL6 module enhances drought tolerance by regulation of flavonoid biosynthesis genes

T Um, J Choi, T Park, PJ Chung, SE Jung, JS Shim… - Plant …, 2022 - Wiley Online Library
Plants have evolved sophisticated defense systems to enhance drought tolerance. These
include the microRNA (miRNA) group of small noncoding RNAs that act as post …

Redox signaling mediates the expression of a sulfate‐deprivation‐inducible micro RNA 395 in A rabidopsis

G Jagadeeswaran, YF Li, R Sunkar - The Plant Journal, 2014 - Wiley Online Library
Summary Micro RNA 395 (miR395) is a conserved mi RNA that targets a low‐affinity sulfate
transporter (AST 68) and three ATP sulfurylases (APS 1, APS 3 and APS 4) in higher plants …