Status and prospects of association mapping in plants

C Zhu, M Gore, ES Buckler, J Yu - The plant genome, 2008 - Wiley Online Library
There is tremendous interest in using association mapping to identify genes responsible for
quantitative variation of complex traits with agricultural and evolutionary importance. Recent …

Association mapping: critical considerations shift from genotyping to experimental design

S Myles, J Peiffer, PJ Brown, ES Ersoz, Z Zhang… - The Plant …, 2009 - academic.oup.com
The goal of many plant scientists' research is to explain natural phenotypic variation in terms
of simple changes in DNA sequence. Traditionally, linkage mapping has been the most …

Genetic design and statistical power of nested association mapping in maize

J Yu, JB Holland, MD McMullen, ES Buckler - Genetics, 2008 - academic.oup.com
We investigated the genetic and statistical properties of the nested association mapping
(NAM) design currently being implemented in maize (26 diverse founders and 5000 distinct …

Marker-assisted plant breeding: principles and practices

BD Singh, AK Singh - 2015 - Springer
Improved genotypes developed by plant breeding remain pivotal to global food security. In
the wake of ever-increasing human population, declining agricultural resources and the …

Genetic architecture of complex traits in plants

JB Holland - Current opinion in plant biology, 2007 - Elsevier
Genetic architecture refers to the numbers and genome locations of genes that affect a trait,
the magnitude of their effects, and the relative contributions of additive, dominant, and …

Factors affecting accuracy from genomic selection in populations derived from multiple inbred lines: a barley case study

S Zhong, JCM Dekkers, RL Fernando, JL Jannink - Genetics, 2009 - academic.oup.com
We compared the accuracies of four genomic-selection prediction methods as affected by
marker density, level of linkage disequilibrium (LD), quantitative trait locus (QTL) number …

Mapping QTL for agronomic traits in breeding populations

T Würschum - Theoretical and Applied Genetics, 2012 - Springer
Detection of quantitative trait loci (QTL) in breeding populations offers the advantage that
these QTL are of direct relevance for the improvement of crops via knowledge-based …

Analysis of natural allelic variation in Arabidopsis using a multiparent recombinant inbred line population

X Huang, MJ Paulo, M Boer, S Effgen… - Proceedings of the …, 2011 - National Acad Sciences
To exploit the diversity in Arabidopsis thaliana, eight founder accessions were crossed to
produce six recombinant inbred line (RIL) subpopulations, together called an Arabidopsis …

Usefulness of Multiparental Populations of Maize (Zea mays L.) for Genome-Based Prediction

C Lehermeier, N Krämer, E Bauer, C Bauland… - Genetics, 2014 - academic.oup.com
The efficiency of marker-assisted prediction of phenotypes has been studied intensively for
different types of plant breeding populations. However, one remaining question is how to …

Rapid cycling genomic selection in a multiparental tropical maize population

X Zhang, P Pérez-Rodríguez… - G3: Genes …, 2017 - academic.oup.com
Genomic selection (GS) increases genetic gain by reducing the length of the selection cycle,
as has been exemplified in maize using rapid cycling recombination of biparental …