Patterns and processes of microbial community assembly

DR Nemergut, SK Schmidt, T Fukami… - Microbiology and …, 2013 - Am Soc Microbiol
Recent research has expanded our understanding of microbial community assembly.
However, the field of community ecology is inaccessible to many microbial ecologists …

Beyond biogeographic patterns: processes shaping the microbial landscape

CA Hanson, JA Fuhrman, MC Horner-Devine… - Nature Reviews …, 2012 - nature.com
Recently, microbiologists have established the existence of biogeographic patterns among a
wide range of microorganisms. The focus of the field is now shifting to identifying the …

Soil microbiomes with distinct assemblies through vertical soil profiles drive the cycling of multiple nutrients in reforested ecosystems

S Jiao, W Chen, J Wang, N Du, Q Li, G Wei - Microbiome, 2018 - Springer
Background Soil microbiomes play an important role in the services and functioning of
terrestrial ecosystems. However, little is known of their vertical responses to restoration …

Linking soil fungi to bacterial community assembly in arid ecosystems

S Jiao, H Chu, B Zhang, X Wei, W Chen, G Wei - Imeta, 2022 - Wiley Online Library
Revealing the roles of biotic factors in driving community assembly, which is crucial for the
understanding of biodiversity and ecosystem functions, is a fundamental but infrequently …

Bacterial communities in oil contaminated soils: biogeography and co-occurrence patterns

S Jiao, Z Liu, Y Lin, J Yang, W Chen, G Wei - Soil Biology and Biochemistry, 2016 - Elsevier
To improve the knowledge about the biogeographic patterns of bacteria in soils
contaminated with crude oil, we studied the effects of local geochemical properties and …

Microbiome and Exudates of the Root and Rhizosphere of Brachypodium distachyon, a Model for Wheat

A Kawasaki, S Donn, PR Ryan, U Mathesius, R Devilla… - PloS one, 2016 - journals.plos.org
The rhizosphere microbiome is regulated by plant genotype, root exudates and
environment. There is substantial interest in breeding and managing crops that host root …

Soil fertility is associated with fungal and bacterial richness, whereas pH is associated with community composition in polar soil microbial communities

SD Siciliano, AS Palmer, T Winsley, E Lamb… - Soil Biology and …, 2014 - Elsevier
Microbial activities in Arctic and Antarctic soils are of particular interest due to uncertainty
surrounding the fate of the enormous polar soil organic matter (SOM) pools and the potential …

Ecological theory as a foundation to control pathogenic invasion in aquaculture

P De Schryver, O Vadstein - The ISME journal, 2014 - academic.oup.com
Detrimental host–pathogen interactions are a normal phenomenon in aquaculture animal
production, and have been counteracted by prophylactic use of antibiotics. Especially, the …

Local and regional factors influencing bacterial community assembly

ES Lindström, S Langenheder - Environmental Microbiology …, 2012 - Wiley Online Library
The classical view states that microbial biogeography is not affected by dispersal barriers or
historical events, but only influenced by the local contemporary habitat conditions (species …

Evolution of bacterial communities in the wheat crop rhizosphere

S Donn, JA Kirkegaard, G Perera… - Environmental …, 2015 - Wiley Online Library
The gap between current average global wheat yields and that achievable through best
agronomic management and crop genetics is large. This is notable in intensive wheat …