Epigenetic regulation of nuclear processes in fungal plant pathogens

HM Kramer, DE Cook, MF Seidl… - PLoS Pathogens, 2023 - journals.plos.org
Through the association of protein complexes to DNA, the eukaryotic nuclear genome is
broadly organized into open euchromatin that is accessible for enzymes acting on DNA and …

A thousand-genome panel retraces the global spread and adaptation of a major fungal crop pathogen

A Feurtey, C Lorrain, MC McDonald, A Milgate… - Nature …, 2023 - nature.com
Human activity impacts the evolutionary trajectories of many species worldwide. Global
trade of agricultural goods contributes to the dispersal of pathogens reshaping their genetic …

Epigenetic modifications affect the rate of spontaneous mutations in a pathogenic fungus

M Habig, C Lorrain, A Feurtey, J Komluski… - Nature …, 2021 - nature.com
Mutations are the source of genetic variation and the substrate for evolution. Genome-wide
mutation rates appear to be affected by selection and are probably adaptive. Mutation rates …

Copy number variation introduced by a massive mobile element facilitates global thermal adaptation in a fungal wheat pathogen

SM Tralamazza, E Gluck-Thaler, A Feurtey… - Nature …, 2024 - nature.com
Copy number variation (CNV) can drive rapid evolution in changing environments. In
microbial pathogens, such adaptation is a key factor underpinning epidemics and …

Recent transposable element bursts are associated with the proximity to genes in a fungal plant pathogen

U Oggenfuss, D Croll - PLoS Pathogens, 2023 - journals.plos.org
The activity of transposable elements (TEs) contributes significantly to pathogen genome
evolution. TEs often destabilize genome integrity but may also confer adaptive variation in …

[PDF][PDF] Transposable Elements Contribute to Genome Dynamics and Gene Expression Variation in the Fungal Plant Pathogen Verticillium dahliae

DE Torres, BPHJ Thomma… - Genome Biology and …, 2021 - academic.oup.com
Transposable elements (TEs) are a major source of genetic and regulatory variation in their
host genome and are consequently thought to play important roles in evolution. Many fungal …

H4K20me3 is important for Ash1-mediated H3K36me3 and transcriptional silencing in facultative heterochromatin in a fungal pathogen

M Möller, JB Ridenour, DF Wright, FA Martin… - PLoS …, 2023 - journals.plos.org
Facultative heterochromatin controls development and differentiation in many eukaryotes. In
metazoans, plants, and many filamentous fungi, facultative heterochromatin is characterized …

Recent reactivation of a pathogenicity-associated transposable element is associated with major chromosomal rearrangements in a fungal wheat pathogen

T Badet, SM Tralamazza, A Feurtey… - Nucleic Acids …, 2024 - academic.oup.com
Transposable elements (TEs) are key drivers of genomic variation contributing to recent
adaptation in most species. Yet, the evolutionary origins and insertion dynamics within …

Current genetic strategies to investigate gene functions in Trichoderma reesei

C Ma, J Liu, J Tang, Y Sun, X Jiang, T Zhang… - Microbial Cell …, 2023 - Springer
The filamentous fungus Trichoderma reesei (teleomorph Hypocrea jecorina, Ascomycota) is
a well-known lignocellulolytic enzymes-producing strain in industry. To increase the …

Differential regulation and production of secondary metabolites among isolates of the fungal wheat pathogen Zymoseptoria tritici

MA Hassani, E Oppong-Danquah… - Applied and …, 2022 - Am Soc Microbiol
The genome of the wheat-pathogenic fungus Zymoseptoria tritici represents extensive
presence-absence variation in gene content. Here, we addressed variation in biosynthetic …